RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	HPCA	P84074	193 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CAV1	Q03135	178 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	DCUN1D2	Q6PH85	259 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SESTD1	Q86VW0	696 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TMPRSS6	Q8IU80	811 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CBWD1	Q9BRT8	395 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	LRRC19	Q9H756	370 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	RAB20	Q9NX57	234 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PCDHA2	Q9Y5H9	948 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	RBM47	A0AV96	593 aa	Known RBP	11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PROC	P04070	461 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	MAN1A1	P33908	653 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	DCTN2	Q13561	401 aa	Known RBP	11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TRMT5	Q32P41	509 aa	Known RBP	11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TRIM50	Q86XT4	487 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	RSAD2	Q8WXG1	361 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CSRNP1	Q96S65	589 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	JMJD4	Q9H9V9	463 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	AGPAT3	Q9NRZ7	376 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	AKAP11	Q9UKA4	1901 aa		11.14	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	DCC	P43146	1447 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	DCAF8L1	A6NGE4	600 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CYB561D2	O14569	222 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ECE2	O60344	883 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	HNRNPCL1	O60812	293 aa	Known RBP	11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CAPN15	O75808	1086 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	MAP3K6	O95382	1288 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ANXA13	P27216	316 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	VAMP7	P51809	220 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	MARS	P56192	900 aa	Known RBP	11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	NAA20	P61599	178 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PPP3CA	Q08209	521 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PTK7	Q13308	1070 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ATP1A4	Q13733	1029 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PTK6	Q13882	451 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	NADK2	Q4G0N4	442 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SH3D19	Q5HYK7	790 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CRLF3	Q8IUI8	442 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	NUDCD3	Q8IVD9	361 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	RNF169	Q8NCN4	708 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	LRGUK	Q96M69	825 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TSC22D4	Q9Y3Q8	395 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	NHSL1	Q5SYE7	1610 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	LDHC	P07864	332 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	MLH1	P40692	756 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SERPINB8	P50452	374 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PRAME	P78395	509 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	FOLH1	Q04609	750 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	OASL	Q15646	514 aa	Known RBP	11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	EFHC1	Q5JVL4	640 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	BSPRY	Q5W0U4	402 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PPP1R18	Q6NYC8	613 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ANO5	Q75V66	913 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	DHDDS	Q86SQ9	333 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	C7orf43	Q8WVR3	580 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SLC4A9	Q96Q91	983 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TUT1	Q9H6E5	874 aa	Known RBP	11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CAAP1	Q9H8G2	361 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	MAD1L1	Q9Y6D9	718 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PCNT	O95613	3336 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PNMA6F	A0A0J9YX94	578 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TRIM43B	A6NCK2	446 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PIK3CD	O00329	1044 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	EIF4B	P23588	611 aa	Known RBP	11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	RGS2	P41220	211 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CHN2	P52757	468 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	GEMIN4	P57678	1058 aa	Known RBP	11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	KRT81	Q14533	505 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PDK1	Q15118	436 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CCDC92	Q53HC0	331 aa	Predicted RBP	11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PPP1R2P3	Q6NXS1	205 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	POLN	Q7Z5Q5	900 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	FBXO36	Q8NEA4	188 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ETNPPL	Q8TBG4	499 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	EPS8L1	Q8TE68	723 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	KANSL3	Q9P2N6	904 aa		11.13	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	FAM155B	O75949	473 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ALAS1	P13196	640 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	NRL	P54845	237 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SH3BGR	P55822	239 aa	Predicted RBP	11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	FAAP100	Q0VG06	881 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SMTNL2	Q2TAL5	461 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SBK1	Q52WX2	424 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ZNF394	Q53GI3	561 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TNFAIP8L3	Q5GJ75	292 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	CC2D2B	Q6DHV5	1058 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	OLFML1	Q6UWY5	402 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	DPH6	Q7L8W6	267 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	ZNF554	Q86TJ5	538 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	DEFB107A	Q8IZN7	70 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	SENP1	Q9P0U3	644 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	INPP5F	Q9Y2H2	1132 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	TRIM49D1	C9J1S8	452 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597		E5RJQ4	531 aa		11.12	□□□□□ -0.63
TRAPPC12-223	ENST00000497597	C6orf229	H3BNL8	230 aa		11.12	□□□□□ -0.63

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