RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 PIAS3Q9Y6X2 628 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 GRIN2BQ13224 1484 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 GAPVD1Q14C86 1478 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 PBRM1Q86U86 1689 aa6.71□□□□□ -1.33
BRCA1-224ENST00000497488 A0A0A6YYK5 440 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-224ENST00000497488 TMEM233B4DJY2 109 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 CHL1O00533 1208 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 PCDH17O14917 1159 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 DNPH1O43598 174 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 CUTAO60888 179 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 BEST1O76090 585 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 ALX3O95076 343 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 MATN4O95460 622 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 HSPA1AP0DMV8 641 aaKnown RBP6.71□□□□□ -1.34
BRCA1-224ENST00000497488 HSPA1BP0DMV9 641 aaKnown RBP6.71□□□□□ -1.34
BRCA1-224ENST00000497488 SCG2P13521 617 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 FAHP16930 419 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 PTGS1P23219 599 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 MAP4P27816 1152 aaKnown RBP6.71□□□□□ -1.34
BRCA1-224ENST00000497488 ARL3P36405 182 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 NNMTP40261 264 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 PIK3CGP48736 1102 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 ATP8B2P98198 1209 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 NEXNQ0ZGT2 675 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 GPR68Q15743 365 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 TBCEQ15813 527 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-224ENST00000497488 MST1LQ2TV78 715 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 RAP1GAP2Q684P5 730 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 CRTC1Q6UUV9 634 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 Q6ZS46 218 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 SZRD1Q7Z422 152 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 BMP8AQ7Z5Y6 402 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 SLCO6A1Q86UG4 719 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 SP8Q8IXZ3 490 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 YAF2Q8IY57 180 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 DIS3L2Q8IYB7 885 aaKnown RBP6.71□□□□□ -1.34
BRCA1-224ENST00000497488 NAT8LQ8N9F0 302 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 USP38Q8NB14 1042 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 GOT1L1Q8NHS2 421 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-224ENST00000497488 SEC14L1Q92503 715 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 RSC1A1Q92681 617 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 FAM120BQ96EK7 910 aaKnown RBP6.71□□□□□ -1.34
BRCA1-224ENST00000497488 CALML4Q96GE6 196 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 TOE1Q96GM8 510 aaKnown RBP6.71□□□□□ -1.34
BRCA1-224ENST00000497488 DBNDD2Q9BQY9 259 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 SOX7Q9BT81 388 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 PDCL3Q9H2J4 239 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 CHODLQ9H9P2 273 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 XAB2Q9HCS7 855 aaKnown RBP6.71□□□□□ -1.34
BRCA1-224ENST00000497488 USP40Q9NVE5 1235 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 TBC1D14Q9P2M4 693 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 AJAP1Q9UKB5 411 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-224ENST00000497488 DAPP1Q9UN19 280 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 SMG5Q9UPR3 1016 aaKnown RBP6.71□□□□□ -1.34
BRCA1-224ENST00000497488 DERAQ9Y315 318 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 DTNAQ9Y4J8 743 aa6.71□□□□□ -1.34
BRCA1-224ENST00000497488 A0A1W2PQ45 241 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-224ENST00000497488 A0A1W2PQY0 241 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 A0A1W2PR48 441 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 FADS2P1A8MWK0 482 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 UBE2CO00762 179 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 TSPAN3O60637 253 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 PHF2O75151 1096 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 ADAMTS2O95450 1211 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 CLEC3BP05452 202 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 CKBP12277 381 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 THBS2P35442 1172 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 ALDH18A1P54886 795 aaKnown RBP6.7□□□□□ -1.34
BRCA1-224ENST00000497488 SRSF11Q05519 484 aaKnown RBP6.7□□□□□ -1.34
BRCA1-224ENST00000497488 SLC5A9Q2M3M2 681 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 DUSP28Q4G0W2 176 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.7□□□□□ -1.34
BRCA1-224ENST00000497488 CCDC158Q5M9N0 1113 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 DCAF12L1Q5VU92 463 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 LRCH2Q5VUJ6 765 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 ZNF385CQ66K41 422 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-224ENST00000497488 KAZNQ674X7 775 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 LRSAM1Q6UWE0 723 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 RAB11FIP2Q7L804 512 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 THAP5Q7Z6K1 395 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 PPP1R14CQ8TAE6 165 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 USP6NLQ92738 828 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 KCNN1Q92952 543 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 CUL5Q93034 780 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 UBE2FQ969M7 185 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 HAPLN2Q9GZV7 340 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 C2orf40Q9H1Z8 148 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 TRPV4Q9HBA0 871 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 STK17AQ9UEE5 414 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 ACSL6Q9UKU0 697 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 ZNF215Q9UL58 517 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-224ENST00000497488 ZDHHC8Q9ULC8 765 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 HSF4Q9ULV5 492 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 CA14Q9ULX7 337 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 DNAJC16Q9Y2G8 782 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 USP15Q9Y4E8 981 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-224ENST00000497488 PSAT1Q9Y617 370 aa6.7□□□□□ -1.34
BRCA1-224ENST00000497488 ZFP37Q9Y6Q3 630 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-224ENST00000497488 MAGI1Q96QZ7 1491 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-224ENST00000497488 E7EVH7 732 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms