RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 L2HGDHQ9H9P8 463 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 ATP6V0A4Q9HBG4 840 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 HOMER3Q9NSC5 361 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 ANKEF1Q9NU02 776 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 EHD2Q9NZN4 543 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 CEP72Q9P209 647 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 PCDHA13Q9Y5I0 950 aa6.57□□□□□ -1.36
SSBP1-213ENST00000496622 NFASCO94856 1347 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 IGSF9BQ9UPX0 1349 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 A0A1W2PQJ5 194 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 TBKBP1A7MCY6 615 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 ZBTB42B2RXF5 422 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 FOXN3O00409 490 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 NCK2O43639 380 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 KIAA0754O94854 1291 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 ATG7O95352 703 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 SLC25A27O95847 323 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 LDHAP00338 332 aaKnown RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 ICAM3P32942 547 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 ACTN2P35609 894 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 RNF144AP50876 292 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 ZNF157P51786 506 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 VAMP7P51809 220 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 INHBCP55103 352 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 NCKAP1LP55160 1127 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 RNASE9P60153 205 aaKnown RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 RASA2Q15283 850 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 ASTE1Q2TB18 679 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 CELF3Q5SZQ8 465 aaKnown RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 CCDC62Q6P9F0 684 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 UNC5DQ6UXZ4 953 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 RHPN2Q8IUC4 686 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 GLYCTKQ8IVS8 523 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 ARHGEF19Q8IW93 802 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 GPR161Q8N6U8 529 aaKnown RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 RNF149Q8NC42 400 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 HELQQ8TDG4 1101 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 AFG1LQ8WV93 481 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 DHX38Q92620 1227 aaKnown RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 SPDL1Q96EA4 605 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 ASIC4Q96FT7 647 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 NLRP4Q96MN2 994 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 GRIP2Q9C0E4 1043 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 PLEKHA4Q9H4M7 779 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 AZI2Q9H6S1 392 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 UBE2TQ9NPD8 197 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 DNAJC12Q9UKB3 198 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 FAM184BQ9ULE4 1060 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 ZNF510Q9Y2H8 683 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 TIMM22Q9Y584 194 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 OTOFQ9HC10 1997 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 PTPRJQ12913 1337 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 A0A087WUV0 522 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 K7ERI5 159 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 B4GALT5O43286 388 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 CEP104O60308 925 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 WFS1O76024 890 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 SLU7O95391 586 aaKnown RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 SNAI1O95863 264 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 IQCF3P0C7M6 154 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 CETPP11597 493 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 KLRC1P26715 233 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 CYLC1P35663 651 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 TNFSF9P41273 254 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 MAGEA1P43355 309 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 NLRP11P59045 1033 aaKnown RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 SIM2Q14190 667 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 DRAP1Q14919 205 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 SPA17Q15506 151 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 CCL14Q16627 93 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 SLC9C1Q4G0N8 1177 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 C4orf17Q53FE4 359 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 C2CD6Q53TS8 623 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 C10orf76Q5T2E6 689 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 FBXW10Q5XX13 1052 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 SPOPLQ6IQ16 392 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 RIPOR1Q6ZS17 1223 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 GPR142Q7Z601 462 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 MAP4K3Q8IVH8 894 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 LMO3Q8TAP4 145 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 NPLOC4Q8TAT6 608 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 TAS1R2Q8TE23 839 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 RBM41Q96IZ5 413 aaKnown RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 HHIPL1Q96JK4 782 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 TMEM117Q9H0C3 514 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 DHX33Q9H6R0 707 aaKnown RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 TMEM206Q9H813 350 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 MINDY3Q9H8M7 445 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 PDE11AQ9HCR9 933 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 SEPT11Q9NVA2 429 aaKnown RBP6.56□□□□□ -1.36
SSBP1-213ENST00000496622 ZNF358Q9NW07 568 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 TAS2R14Q9NYV8 317 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 HYOU1Q9Y4L1 999 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 IVNS1ABPQ9Y6Y0 642 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 UNC79Q9P2D8 2635 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 UNC80Q8N2C7 3258 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 PIEZO1Q92508 2521 aa6.56□□□□□ -1.36
SSBP1-213ENST00000496622 MCM3APO60318 1980 aa6.55□□□□□ -1.36
SSBP1-213ENST00000496622 PARP14Q460N5 1801 aa6.55□□□□□ -1.36
SSBP1-213ENST00000496622 IGKV6D-21A0A0A0MT36 114 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms