RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 MORC3Q14149 939 aa17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 ZACNQ401N2 412 aa17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 INTS6LQ5JSJ4 861 aaKnown RBP17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 ANKRD40Q6AI12 368 aa17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 SV2AQ7L0J3 742 aa17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 NPAS3Q8IXF0 933 aa17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 RSAD2Q8WXG1 361 aa17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 FGF13Q92913 245 aa17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 TCEAL4Q96EI5 215 aa17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 MRPL45Q9BRJ2 306 aaKnown RBP17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 LRFN3Q9BTN0 628 aa17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 VRTNQ9H8Y1 702 aa17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 CDH7Q9ULB5 785 aa17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 SORCS3Q9UPU3 1222 aa17.3■□□□□ 0.36
DNMT3A-215ENST00000496570 PPP1R3GB7ZBB8 358 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 IKBKBO14920 756 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 TRIM49P0CI25 452 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 TRIM49CP0CI26 452 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 CEBPBP17676 345 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 ATF6P18850 670 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 RPL13P26373 211 aaKnown RBP17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 ATICP31939 592 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 PSMC2P35998 433 aaKnown RBP17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 LHX1P48742 406 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 VAMP7P51809 220 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 ENPEPQ07075 957 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 HTR4Q13639 388 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 WDR72Q3MJ13 1102 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 TRIM67Q6ZTA4 783 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 TMC8Q8IU68 726 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 FAM186BQ8IYM0 893 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 ST13P5Q8NFI4 369 aaPredicted RBP17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 ASIC4Q96FT7 647 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 CORO1BQ9BR76 489 aa17.29■□□□□ 0.36
DNMT3A-215ENST00000496570 ATP2C2O75185 946 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 TACC1O75410 805 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 HAPLN1P10915 354 aaPredicted RBP17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 SMARCB1Q12824 385 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 BIRC3Q13489 604 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 TRPC3Q13507 836 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 NCOA4Q13772 614 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 TMEM31Q5JXX7 168 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 FAM171BQ6P995 826 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 INTS8Q75QN2 995 aaKnown RBP17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 DCP1BQ8IZD4 617 aaKnown RBP17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 C2orf15Q8WU43 125 aaKnown RBP17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 ING5Q8WYH8 240 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 LPIN3Q9BQK8 851 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 MKNK1Q9BUB5 465 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 RPP25Q9BUL9 199 aaKnown RBP17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 SDCBP2Q9H190 292 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 ZNF334Q9HCZ1 680 aaPredicted RBP17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 CRTAC1Q9NQ79 661 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 GTF3C4Q9UKN8 822 aa17.28■□□□□ 0.36
DNMT3A-215ENST00000496570 MYBPHLA2RUH7 354 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 BIN1O00499 593 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 PHACTR2O75167 634 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 LRRN2O75325 713 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 FAM163BP0C2L3 166 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 CCNE1P24864 410 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 MYL7Q01449 175 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 TSPY1Q01534 308 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 MTMR3Q13615 1198 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 CAMK4Q16566 473 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 PARM1Q6UWI2 310 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 SPPL2BQ8TCT7 592 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 FGF14Q92915 247 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 PSMG2Q969U7 264 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 SYAP1Q96A49 352 aaPredicted RBP17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 ZNF512Q96ME7 567 aaPredicted RBP17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 IPO9Q96P70 1041 aaKnown RBP17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 MMS19Q96T76 1030 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 DUSP9Q99956 384 aaKnown RBP17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 GTPBP4Q9BZE4 634 aaKnown RBP17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 SMYD3Q9H7B4 428 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 ABI2Q9NYB9 513 aaPredicted RBP17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 IGSF9Q9P2J2 1179 aa17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 MRPS23Q9Y3D9 190 aaKnown RBP17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 R3HCC1Q9Y3T6 440 aaKnown RBP17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 ZFP37Q9Y6Q3 630 aaPredicted RBP17.27■□□□□ 0.36
DNMT3A-215ENST00000496570 PTPRDP23468 1912 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 PRR33A8MZF0 331 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 CETN3O15182 167 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 MICAL2O94851 1124 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 HLA-DRAP01903 254 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 PCSK1P29120 753 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 ALDH1A3P47895 512 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 GCLMP48507 274 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 GPR15P49685 360 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 PSMC1P62191 440 aaKnown RBP17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 LRRC63Q05C16 580 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 SIGLEC14Q08ET2 396 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 PLD1Q13393 1074 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 TDGQ13569 410 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 ZNF699Q32M78 642 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 TTI2Q6NXR4 508 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 HFE2Q6ZVN8 426 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 DNAJB7Q7Z6W7 309 aaPredicted RBP17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 SLC44A3Q8N4M1 653 aa17.26■□□□□ 0.35
DNMT3A-215ENST00000496570 DHTKD1Q96HY7 919 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms