RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 AAMPQ13685 434 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 CTTNQ14247 550 aaKnown RBP12.77□□□□□ -0.37
ATG3-209ENST00000496423 C2orf27AQ580R0 203 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 NCAPH2Q6IBW4 605 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 ARMCX5Q6P1M9 558 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 USP33Q8TEY7 942 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 RLN3Q8WXF3 142 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 ATP2A3Q93084 1043 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 FCRL3Q96P31 734 aaPredicted RBP12.77□□□□□ -0.37
ATG3-209ENST00000496423 PGLYRP2Q96PD5 576 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 PNMA5Q96PV4 448 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 FNBP1Q96RU3 617 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 POLR3CQ9BUI4 534 aaPredicted RBP12.77□□□□□ -0.37
ATG3-209ENST00000496423 DNAJC25Q9H1X3 360 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 FAM124BQ9H5Z6 455 aaPredicted RBP12.77□□□□□ -0.37
ATG3-209ENST00000496423 PRORYQ9H606 182 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 ECT2Q9H8V3 914 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 RGL1Q9NZL6 768 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 HSFX1Q9UBD0 423 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 SUSD2Q9UGT4 822 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 DACH1Q9UI36 760 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 CEP192Q8TEP8 1941 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 ATXN2Q99700 1313 aaKnown RBP12.77□□□□□ -0.37
ATG3-209ENST00000496423 OTOL1A6NHN0 477 aaPredicted RBP12.76□□□□□ -0.37
ATG3-209ENST00000496423 ZBTB39O15060 712 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 ZBTB24O43167 697 aaPredicted RBP12.76□□□□□ -0.37
ATG3-209ENST00000496423 GNSP15586 552 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 LIG1P18858 919 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 U2AF2P26368 475 aaKnown RBP eCLIP12.76□□□□□ -0.37
ATG3-209ENST00000496423 IFNAR2P48551 515 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 CYP4F8P98187 520 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 RPL6Q02878 288 aaKnown RBP12.76□□□□□ -0.37
ATG3-209ENST00000496423 HSF5Q4G112 596 aaPredicted RBP12.76□□□□□ -0.37
ATG3-209ENST00000496423 DHX32Q7L7V1 743 aaKnown RBP12.76□□□□□ -0.37
ATG3-209ENST00000496423 GPR155Q7Z3F1 870 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 SLCO6A1Q86UG4 719 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 DAGLBQ8NCG7 672 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 MCPH1Q8NEM0 835 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 SETD7Q8WTS6 366 aaKnown RBP12.76□□□□□ -0.37
ATG3-209ENST00000496423 NAP1L4Q99733 375 aaKnown RBP12.76□□□□□ -0.37
ATG3-209ENST00000496423 CDC6Q99741 560 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 SLC46A2Q9BY10 475 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 ZDHHC5Q9C0B5 715 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 VAV3Q9UKW4 847 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 KIAA1549LQ6ZVL6 1849 aa12.76□□□□□ -0.37
ATG3-209ENST00000496423 A0A1W2PQD8 194 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 OAZ2O95190 189 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 APC2O95996 2303 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 ARSAP15289 507 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 GCFC2P16383 781 aaKnown RBP12.75□□□□□ -0.37
ATG3-209ENST00000496423 SEC13P55735 322 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 ZNF33AQ06730 810 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 EOGTQ5NDL2 527 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 TTC22Q5TAA0 569 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 CREB3L3Q68CJ9 461 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 CDCA2Q69YH5 1023 aaPredicted RBP12.75□□□□□ -0.37
ATG3-209ENST00000496423 CENPPQ6IPU0 288 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 SLFN12Q8IYM2 578 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 EFCAB3Q8N7B9 438 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 DEPTORQ8TB45 409 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 BAP1Q92560 729 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 RNF26Q9BY78 433 aaPredicted RBP12.75□□□□□ -0.37
ATG3-209ENST00000496423 MFRPQ9BY79 579 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 SMG9Q9H0W8 520 aaKnown RBP12.75□□□□□ -0.37
ATG3-209ENST00000496423 FSCN3Q9NQT6 498 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 DUS2Q9NX74 493 aaKnown RBP12.75□□□□□ -0.37
ATG3-209ENST00000496423 VPS54Q9P1Q0 977 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 PCDHA4Q9UN74 947 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 SLC27A5Q9Y2P5 690 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 MYO16Q9Y6X6 1858 aa12.75□□□□□ -0.37
ATG3-209ENST00000496423 SLITRK3O94933 977 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 LYPLA2O95372 231 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 XRCC6P12956 609 aaKnown RBP eCLIP12.74□□□□□ -0.37
ATG3-209ENST00000496423 HLA-EP13747 358 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 EFNA5P52803 228 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 MYBPC2Q14324 1141 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 PPP2R5AQ15172 486 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 PLEKHG6Q3KR16 790 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 TAF1BQ53T94 588 aaPredicted RBP12.74□□□□□ -0.37
ATG3-209ENST00000496423 SYCP2LQ5T4T6 812 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 ATF7IP2Q5U623 682 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 RGL4Q8IZJ4 473 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 BLIDQ8IZY5 108 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 CCDC33Q8N5R6 958 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 MAB21L3Q8N8X9 362 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 ENGASEQ8NFI3 743 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 KCNMB3Q9NPA1 279 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 PLXND1Q9Y4D7 1925 aa12.74□□□□□ -0.37
ATG3-209ENST00000496423 KALRNO60229 2985 aa12.73□□□□□ -0.37
ATG3-209ENST00000496423 MYO18BQ8IUG5 2567 aa12.73□□□□□ -0.37
ATG3-209ENST00000496423 PTPRDP23468 1912 aa12.73□□□□□ -0.37
ATG3-209ENST00000496423 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
ATG3-209ENST00000496423 ATP2B1P20020 1258 aa12.73□□□□□ -0.37
ATG3-209ENST00000496423 GRM5P41594 1212 aa12.73□□□□□ -0.37
ATG3-209ENST00000496423 EXOSC10Q01780 885 aaKnown RBP12.73□□□□□ -0.37
ATG3-209ENST00000496423 SOX4Q06945 474 aaPredicted RBP12.73□□□□□ -0.37
ATG3-209ENST00000496423 ZNF268Q14587 947 aaPredicted RBP12.73□□□□□ -0.37
ATG3-209ENST00000496423 XKR4Q5GH76 650 aa12.73□□□□□ -0.37
ATG3-209ENST00000496423 GALNT17Q6IS24 598 aa12.73□□□□□ -0.37
ATG3-209ENST00000496423 MAEAQ7L5Y9 396 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms