RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 KLHL5Q96PQ7 755 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 ZFP14Q9HCL3 533 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 PLCB1Q9NQ66 1216 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 SLC8A2Q9UPR5 921 aa9.1□□□□□ -0.95
VPS13B-206ENST00000496144 NRP1O14786 923 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 CCL16O15467 120 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 PON1P27169 355 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 ADGRE1Q14246 886 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 CORO1BQ9BR76 489 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 METTL14Q9HCE5 456 aaKnown RBP9.09□□□□□ -0.95
VPS13B-206ENST00000496144 TRPC7Q9HCX4 862 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 SIX2Q9NPC8 291 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 BCCIPQ9P287 314 aaKnown RBP eCLIP9.09□□□□□ -0.953e-8■■■■■ 27.3
VPS13B-206ENST00000496144 FBXL5Q9UKA1 691 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 OR6C75A6NL08 312 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 TGFB1I1O43294 461 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 LYPLA2O95372 231 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 AKAP5P24588 427 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 CDC25CP30307 473 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 TAF6P49848 677 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 TFAMQ00059 246 aaKnown RBP9.09□□□□□ -0.95
VPS13B-206ENST00000496144 APBA1Q02410 837 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 SMAD2Q15796 467 aaKnown RBP9.09□□□□□ -0.95
VPS13B-206ENST00000496144 MRPL43Q8N983 215 aaKnown RBP9.09□□□□□ -0.95
VPS13B-206ENST00000496144 C12orf50Q8NA57 414 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-206ENST00000496144 TMEM174Q8WUU8 243 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 CLP1Q92989 425 aaKnown RBP9.09□□□□□ -0.95
VPS13B-206ENST00000496144 UBXN6Q9BZV1 441 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-206ENST00000496144 BTNL10A8MVZ5 291 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 ZBTB39O15060 712 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 MAPTP10636 758 aaKnown RBP9.09□□□□□ -0.95
VPS13B-206ENST00000496144 PLA2G4AP47712 749 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 SLC11A1P49279 550 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 TPGS2Q68CL5 300 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 NKD2Q969F2 451 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-206ENST00000496144 CASD1Q96PB1 797 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 ALS2CR12Q96Q35 445 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 AGO3Q9H9G7 860 aaKnown RBP9.09□□□□□ -0.95
VPS13B-206ENST00000496144 DHX15O43143 795 aaKnown RBP9.09□□□□□ -0.95
VPS13B-206ENST00000496144 SRGAP2O75044 1071 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 GPR32O75388 356 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 AKAP3O75969 853 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 SASH3O75995 380 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 IGHA2P01877 340 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 KLHDC7AQ5VTJ3 777 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 TMEM134Q9H6X4 195 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 MUTYHQ9UIF7 546 aa9.09□□□□□ -0.95
VPS13B-206ENST00000496144 LSM7Q9UK45 103 aaKnown RBP9.09□□□□□ -0.95
VPS13B-206ENST00000496144 ARL5CA6NH57 179 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 TACC1O75410 805 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 CSDE1O75534 798 aaKnown RBP9.08□□□□□ -0.96
VPS13B-206ENST00000496144 GALTP07902 379 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 PRLRP16471 622 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 NMT1P30419 496 aaKnown RBP9.08□□□□□ -0.96
VPS13B-206ENST00000496144 GABPB1Q06547 395 aaPredicted RBP9.08□□□□□ -0.96
VPS13B-206ENST00000496144 SCN4BQ8IWT1 228 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 PGBD3Q8N328 593 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 HASPINQ8TF76 798 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 ARMCX3Q9UH62 379 aaPredicted RBP9.08□□□□□ -0.96
VPS13B-206ENST00000496144 JRKLQ9Y4A0 524 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 CLUHO75153 1309 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 SFI1A8K8P3 1242 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 FOXD2O60548 495 aaPredicted RBP9.08□□□□□ -0.96
VPS13B-206ENST00000496144 ATXN3P54252 364 aaPredicted RBP9.08□□□□□ -0.96
VPS13B-206ENST00000496144 DMTNQ08495 405 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 ZNF720Q7Z2F6 126 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 CPA6Q8N4T0 437 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 SH2D3AQ9BRG2 576 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 SEMA4AQ9H3S1 761 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 CAPN6Q9Y6Q1 641 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 TARSL2A2RTX5 802 aaKnown RBP9.08□□□□□ -0.96
VPS13B-206ENST00000496144 GTPBP10A4D1E9 387 aaKnown RBP9.08□□□□□ -0.96
VPS13B-206ENST00000496144 CCDC151A5D8V7 595 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 ZNF623O75123 536 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 C8AP07357 584 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 PSMC2P35998 433 aaKnown RBP9.08□□□□□ -0.96
VPS13B-206ENST00000496144 ZXDAP98168 799 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 KCNA1Q09470 495 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 NLRC4Q9NPP4 1024 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 NENFQ9UMX5 172 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 DAAM1Q9Y4D1 1078 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 PPP1R37O75864 691 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 RECQL4O94761 1208 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 ENOX2Q16206 610 aaKnown RBP9.08□□□□□ -0.96
VPS13B-206ENST00000496144 NFE2Q16621 373 aaPredicted RBP9.08□□□□□ -0.96
VPS13B-206ENST00000496144 ZC2HC1CQ53FD0 456 aaPredicted RBP9.08□□□□□ -0.96
VPS13B-206ENST00000496144 ATXN3LQ9H3M9 355 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 WDR93Q6P2C0 686 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 PCYT2Q99447 389 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 MKNK1Q9BUB5 465 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 CA14Q9ULX7 337 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 SNX12Q9UMY4 172 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 TNFSF13BQ9Y275 285 aa9.08□□□□□ -0.96
VPS13B-206ENST00000496144 IGKV6D-21A0A0A0MT36 114 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 C2orf71A6NGG8 1288 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 SLC9A3R1O14745 358 aaPredicted RBP9.07□□□□□ -0.96
VPS13B-206ENST00000496144 CLIC2O15247 247 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 TSPAN1O60635 241 aa9.07□□□□□ -0.96
VPS13B-206ENST00000496144 CASP4P49662 377 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms