RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 ATMQ13315 3056 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 ABCA7Q8IZY2 2146 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 PYCARD-AS1I3L0S3 204 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 SYN3O14994 580 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 ITPKAP23677 461 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 U2AF2P26368 475 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 ITPKBP27987 946 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 QARSP47897 775 aaKnown RBP10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 GALK1P51570 392 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 EPHB3P54753 998 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 USP46P62068 366 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 CYP4A11Q02928 519 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 UPP1Q16831 310 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 TAF1BQ53T94 588 aaPredicted RBP10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 CC2D1AQ6P1N0 951 aaPredicted RBP10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 GPR155Q7Z3F1 870 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 GALNT15Q8N3T1 639 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 DAGLBQ8NCG7 672 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 OR2I1PQ8NGU4 316 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 WHAMMQ8TF30 809 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 RLN3Q8WXF3 142 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 CHFRQ96EP1 664 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 GCNAQ96QF7 691 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 UCN2Q96RP3 112 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 POLR3CQ9BUI4 534 aaPredicted RBP10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 HPS4Q9NQG7 708 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 RCAN3Q9UKA8 241 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 PLXNB3Q9ULL4 1909 aa10.54□□□□□ -0.72
SMARCAL1-213ENST00000496037 NUP210Q8TEM1 1887 aaPredicted RBP10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 KIF26AQ9ULI4 1882 aaPredicted RBP10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 ESYT2A0FGR8 921 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 ANKRD33BA6NCL7 494 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 RRP8O43159 456 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 MARCH6O60337 910 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 WISP1O95388 367 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 IGFBP6P24592 240 aaPredicted RBP10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 GABRR2P28476 465 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 GNA11P29992 359 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 P2RY2P41231 377 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 ALDH1A3P47895 512 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 POU5F1BQ06416 359 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 BYSLQ13895 437 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 CAPSQ13938 189 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 RTN1Q16799 776 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 GLRA4Q5JXX5 417 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 TRIM68Q6AZZ1 485 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 OTUD6AQ7L8S5 288 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 GLRX5Q86SX6 157 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 SLCO6A1Q86UG4 719 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 C3orf58Q8NDZ4 430 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 FNBP1Q96RU3 617 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 SPSB2Q99619 263 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 FAM83CQ9BQN1 747 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 ADPGKQ9BRR6 497 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 LRRC3Q9BY71 257 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 NFKBIZQ9BYH8 718 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 ZMYND12Q9H0C1 365 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 CAPN10Q9HC96 672 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 FBRSL1Q9HCM7 1045 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 SLC27A5Q9Y2P5 690 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 TMA7Q9Y2S6 64 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 NUB1Q9Y5A7 615 aa10.53□□□□□ -0.72
SMARCAL1-213ENST00000496037 OTOL1A6NHN0 477 aaPredicted RBP10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 N4BP3O15049 544 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 AP5Z1O43299 807 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 WEE1P30291 646 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 YWHABP31946 246 aaKnown RBP10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 PTH1RQ03431 593 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 VAC14Q08AM6 782 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 XKR9Q5GH70 373 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 B3GNT9Q6UX72 402 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 CD300LGQ6UXG3 332 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 RNF19BQ6ZMZ0 732 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 CPA6Q8N4T0 437 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 OLIG1Q8TAK6 271 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 BICD2Q8TD16 824 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 CD101Q93033 1021 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 PRIMPOLQ96LW4 560 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 TBC1D32Q96NH3 1257 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 SMG9Q9H0W8 520 aaKnown RBP10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 CXCL16Q9H2A7 254 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 TASP1Q9H6P5 420 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 GOLGA2P5Q9HBQ8 144 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 PRMT7Q9NVM4 692 aaPredicted RBP10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 GDAQ9Y2T3 454 aa10.52□□□□□ -0.73
SMARCAL1-213ENST00000496037 E9PAM4 449 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 ERVH48-1M5A8F1 160 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 RECKO95980 971 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 P4HBP07237 508 aaKnown RBP10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 HLA-EP13747 358 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 ARSAP15289 507 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 GJA4P35212 333 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 USP11P51784 963 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 SEC13P55735 322 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 BFSP1Q12934 665 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 CRY1Q16526 586 aa10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 PFKFB3Q16875 520 aaPredicted RBP10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 NAIF1Q69YI7 327 aaPredicted RBP10.51□□□□□ -0.73
SMARCAL1-213ENST00000496037 PPP4R3AQ6IN85 833 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms