RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	STX10	O60499	249 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	XYLB	O75191	536 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	LRRN2	O75325	713 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	HNRNPA1	P09651	372 aa	Known RBP eCLIP	10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	LMO2	P25791	158 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	PCSK1	P29120	753 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	GNL1	P36915	607 aa	Predicted RBP	10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	LHX1	P48742	406 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	MXI1	P50539	228 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	CDH8	P55286	799 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	NLRP12	P59046	1061 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	PSMC1	P62191	440 aa	Known RBP	10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	TWF1	Q12792	350 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	TPD52L1	Q16890	204 aa	Predicted RBP	10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	CCDC142	Q17RM4	750 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	SGSM1	Q2NKQ1	1148 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	UVSSA	Q2YD98	709 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	KRT39	Q6A163	491 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	DPH6	Q7L8W6	267 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	FILIP1	Q7Z7B0	1213 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	TCEAL8	Q8IYN2	117 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	MLKL	Q8NB16	471 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	KBTBD7	Q8WVZ9	684 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	SEPT5	Q99719	369 aa	Predicted RBP	10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	LPIN3	Q9BQK8	851 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	CORO1B	Q9BR76	489 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	CRISPLD1	Q9H336	500 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	METTL14	Q9HCE5	456 aa	Known RBP	10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	TMLHE	Q9NVH6	421 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	PRKAG3	Q9UGI9	489 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	RWDD2A	Q9UIY3	292 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	GTF3C4	Q9UKN8	822 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	YIPF1	Q9Y548	306 aa		10.52	□□□□□ -0.73
CALD1-223	ENST00000496024	MYBPHL	A2RUH7	354 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	C2CD4D	B7Z1M9	353 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	GABRD	O14764	452 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	FGFR1OP	O95684	399 aa	Known RBP	10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	STAU1	O95793	577 aa	Known RBP	10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	ASS1	P00966	412 aa	Known RBP	10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	P4HA1	P13674	534 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	WARS	P23381	471 aa	Known RBP	10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	HOXA9	P31269	272 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	GBP2	P32456	591 aa	Predicted RBP	10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	GTF2H1	P32780	548 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	ORC1	Q13415	861 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	MGAT5B	Q3V5L5	792 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	CBWD6	Q4V339	395 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	INTS6L	Q5JSJ4	861 aa	Known RBP	10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	CBWD3	Q5JTY5	395 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	CBWD5	Q5RIA9	395 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	CCDC183	Q5T5S1	534 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	CAVIN1	Q6NZI2	390 aa	Known RBP	10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	CYP26C1	Q6V0L0	522 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	GET4	Q7L5D6	327 aa	Predicted RBP	10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	LIMS2	Q7Z4I7	341 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	FRMD5	Q7Z6J6	570 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	ELMOD1	Q8N336	334 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	CCDC150	Q8NCX0	1101 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	SEMA4D	Q92854	862 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	MED15	Q96RN5	788 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	SYT15	Q9BQS2	421 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	ACBD6	Q9BR61	282 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	IMPG2	Q9BZV3	1241 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	SDCBP2	Q9H190	292 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	WDR6	Q9NNW5	1121 aa	Known RBP	10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	DNMT3B	Q9UBC3	853 aa	Known RBP	10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	NME7	Q9Y5B8	376 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	PCDHB5	Q9Y5E4	795 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	NOTCH4	Q99466	2003 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	CLUH	O75153	1309 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	DOCK8	Q8NF50	2099 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	DENND4A	Q7Z401	1863 aa		10.51	□□□□□ -0.73
CALD1-223	ENST00000496024	MYH10	P35580	1976 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024		A8MXQ7	604 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	LOC730098	B7Z3J9	87 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	TACC1	O75410	805 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	CCDC192	P0DO97	292 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	PTPN2	P17706	415 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	FSHR	P23945	695 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	CYP2F1	P24903	491 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	ALDH1A3	P47895	512 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	EPHB3	P54753	998 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	NOP14	P78316	857 aa	Known RBP	10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	CYP27A1	Q02318	531 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	ENPEP	Q07075	957 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	LRMP	Q12912	555 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	PABPC1L	Q4VXU2	614 aa	Known RBP	10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	HSP90AA4P	Q58FG1	418 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	MDH1B	Q5I0G3	518 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	IQCE	Q6IPM2	695 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	SASS6	Q6UVJ0	657 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	SPATA2L	Q8IUW3	424 aa	Predicted RBP	10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	HS6ST3	Q8IZP7	471 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	TDRD5	Q8NAT2	981 aa	Known RBP	10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	FBXL13	Q8NEE6	735 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	ITFG1	Q8TB96	612 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	SPATA18	Q8TC71	538 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	FAM200A	Q8TCP9	573 aa		10.5	□□□□□ -0.73
CALD1-223	ENST00000496024	GPR152	Q8TDT2	470 aa		10.5	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms