RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 KRT19P08727 400 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 TMEM191BP0C7N4 346 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 RPS9P46781 194 aaKnown RBP18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 ASIC1P78348 528 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 TSPY1Q01534 308 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 BFSP1Q12934 665 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 FOXD4L6Q3SYB3 417 aaPredicted RBP18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 GPR158Q5T848 1215 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 SHC4Q6S5L8 630 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 FOXD4L3Q6VB84 417 aaPredicted RBP18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 GPIHBP1Q8IV16 184 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 ARID3BQ8IVW6 561 aaPredicted RBP18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 CSGALNACT2Q8N6G5 542 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 IQUBQ8NA54 791 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 GIPC2Q8TF65 315 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 RSPRY1Q96DX4 576 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 FAM84AQ96KN4 292 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 FBXO4Q9UKT5 387 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 ITGA11Q9UKX5 1188 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 PIAS3Q9Y6X2 628 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 FANCMQ8IYD8 2048 aa18.25■□□□□ 0.51
APOBEC3A-204ENST00000495988 PTPRZ1P23471 2315 aaPredicted RBP18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 DPYSL4O14531 572 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 HUS1O60921 280 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 HAPLN1P10915 354 aaPredicted RBP18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 CYP4F8P98187 520 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 CSTF1Q05048 431 aaKnown RBP18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 FZD5Q13467 585 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 ZNF528Q3MIS6 628 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 PDCL2Q8N4E4 241 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 LRRC52Q8N7C0 313 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 CSGALNACT1Q8TDX6 532 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 FAM3CQ92520 227 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 GCNAQ96QF7 691 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 MKNK1Q9BUB5 465 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 MTMR12Q9C0I1 747 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 L1RE1Q9UN81 338 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 PCDHB5Q9Y5E4 795 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 NUP210Q8TEM1 1887 aaPredicted RBP18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 FAM186AA6NE01 2351 aa18.24■□□□□ 0.51
APOBEC3A-204ENST00000495988 RIF1Q5UIP0 2472 aaKnown RBP18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 CHADO15335 359 aa18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 F13A1P00488 732 aa18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 ZSCAN22P10073 491 aaPredicted RBP18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 PDIA4P13667 645 aaKnown RBP18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 CDC25CP30307 473 aa18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 RBP5P82980 135 aa18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 FCHO2Q0JRZ9 810 aa18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 NFE2Q16621 373 aaPredicted RBP18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 LMBRD2Q68DH5 695 aaPredicted RBP18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 SCARA3Q6AZY7 606 aa18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 CXorf38Q8TB03 319 aa18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 ANKRD36BP1Q96IX9 119 aa18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 PI4K2AQ9BTU6 479 aa18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 IL21Q9HBE4 155 aa18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 TMLHEQ9NVH6 421 aa18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 DDX43Q9NXZ2 648 aaKnown RBP18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 R3HCC1Q9Y3T6 440 aaKnown RBP18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 SNX9Q9Y5X1 595 aa18.23■□□□□ 0.51
APOBEC3A-204ENST00000495988 VPS13AQ96RL7 3174 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 ZNF233A6NK53 670 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 ARNTLO00327 626 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 KINO60870 393 aaKnown RBP18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 PRPF40AO75400 957 aaKnown RBP18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 MYL7Q01449 175 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 SURF1Q15526 300 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 FAM26FQ5R3K3 315 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 CBWD2Q8IUF1 395 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 ZNF687Q8N1G0 1237 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 TMEM86AQ8N2M4 240 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 ACBD6Q9BR61 282 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 TASP1Q9H6P5 420 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 INTS13Q9NVM9 706 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 GDAP2Q9NXN4 497 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 HSPBP1Q9NZL4 362 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 SIX4Q9UIU6 781 aa18.22■□□□□ 0.51
APOBEC3A-204ENST00000495988 EIF3DO15371 548 aaKnown RBP eCLIP18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 POLR2DO15514 142 aaKnown RBP18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 TNNC2P02585 160 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 ACAT1P24752 427 aaKnown RBP18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 CCNE1P24864 410 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 HOXD13P35453 343 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 ME1P48163 572 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 KPNA1P52294 538 aaPredicted RBP18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 MYO1EQ12965 1108 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 MTAPQ13126 283 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 INTS6LQ5JSJ4 861 aaKnown RBP18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 CNNM4Q6P4Q7 775 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 EPM2AIP1Q7L775 607 aaPredicted RBP18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 TOP6BLQ8N6T0 577 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 ZNF507Q8TCN5 953 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 LRRC3BQ96PB8 259 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 C7orf25Q9BPX7 421 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 MAGEF1Q9HAY2 307 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 OBP2AQ9NY56 170 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 FAM13BQ9NYF5 915 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 PTPRJQ12913 1337 aa18.21■□□□□ 0.51
APOBEC3A-204ENST00000495988 SLC38A8A6NNN8 435 aa18.2■□□□□ 0.5
APOBEC3A-204ENST00000495988 PRAMEF12O95522 483 aa18.2■□□□□ 0.5
APOBEC3A-204ENST00000495988 WEE1P30291 646 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms