RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 LRRN2O75325 713 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 ABLIM3O94929 683 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 WEE2P0C1S8 567 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 CDH8P55286 799 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 CUL2Q13617 745 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 KCNC3Q14003 757 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 NFE2Q16621 373 aaPredicted RBP18.27■□□□□ 0.52
HDAC6-235ENST00000495515 CTC1Q2NKJ3 1217 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 INTS6LQ5JSJ4 861 aaKnown RBP18.27■□□□□ 0.52
HDAC6-235ENST00000495515 LILRA6Q6PI73 481 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 CCDC149Q6ZUS6 474 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 RTL10Q7L3V2 364 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 UNC93AQ86WB7 457 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 OSTM1Q86WC4 334 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.27■□□□□ 0.52
HDAC6-235ENST00000495515 KREMEN2Q8NCW0 462 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 LMO3Q8TAP4 145 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 C2orf15Q8WU43 125 aaKnown RBP18.27■□□□□ 0.52
HDAC6-235ENST00000495515 TATDN2Q93075 761 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 ELMO3Q96BJ8 720 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 TNIP3Q96KP6 325 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 RTP3Q9BQQ7 232 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 SYT15Q9BQS2 421 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 CRACR2AQ9BSW2 395 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 FBXW11Q9UKB1 542 aa18.27■□□□□ 0.52
HDAC6-235ENST00000495515 BARX2Q9UMQ3 279 aaPredicted RBP18.27■□□□□ 0.52
HDAC6-235ENST00000495515 MYO7AQ13402 2215 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 WDR27A2RRH5 827 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 PDGFRBP09619 1106 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 ATF2P15336 505 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 EPCAMP16422 314 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 HOXB8P17481 243 aaPredicted RBP18.26■□□□□ 0.51
HDAC6-235ENST00000495515 ACAT1P24752 427 aaKnown RBP18.26■□□□□ 0.51
HDAC6-235ENST00000495515 RAP1GAPP47736 663 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 GCNT1Q02742 428 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 INCA1Q0VD86 236 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 UVSSAQ2YD98 709 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 TRIM65Q6PJ69 517 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 ENOSF1Q7L5Y1 443 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 PPM1KQ8N3J5 372 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 HLA-CQ95604 372 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 MAN1C1Q9NR34 630 aa18.26■□□□□ 0.51
HDAC6-235ENST00000495515 VWA8A3KMH1 1905 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 TRANK1O15050 2925 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 LGALS16A8MUM7 142 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 PRRG1O14668 218 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 LINC01565O15544 149 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 SERPINC1P01008 464 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 OR4Q2P0C623 313 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 ATP1A3P13637 1013 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 CD58P19256 250 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 LMO2P25791 158 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 ADCY1Q08828 1119 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 SLC39A12Q504Y0 691 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 C4orf50Q6ZRC1 276 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 JAKMIP2Q96AA8 810 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 NT5C1AQ9BXI3 368 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 SDCBP2Q9H190 292 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 UBE2ZQ9H832 354 aaPredicted RBP18.25■□□□□ 0.51
HDAC6-235ENST00000495515 CYP4F11Q9HBI6 524 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 CISHQ9NSE2 258 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 HSFX1Q9UBD0 423 aa18.25■□□□□ 0.51
HDAC6-235ENST00000495515 GLP2RO95838 553 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 SPATA31D3P0C874 917 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 SLC9A1P19634 815 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 PON1P27169 355 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 NDST1P52848 882 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 MFAP3P55082 362 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 UBXN1Q04323 297 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 ANKRD54Q6NXT1 300 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 RNF19BQ6ZMZ0 732 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 SPATA31D4Q6ZUB0 917 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 TCEAL8Q8IYN2 117 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 VN1R2Q8NFZ6 395 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 SPPL2BQ8TCT7 592 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 TMEM209Q96SK2 561 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 SFXN1Q9H9B4 322 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 ZDHHC7Q9NXF8 308 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 APEX2Q9UBZ4 518 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 PCDHB5Q9Y5E4 795 aa18.24■□□□□ 0.51
HDAC6-235ENST00000495515 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-235ENST00000495515 MTMR11A4FU01 709 aa18.23■□□□□ 0.51
HDAC6-235ENST00000495515 CILPO75339 1184 aa18.23■□□□□ 0.51
HDAC6-235ENST00000495515 ZMYND10O75800 440 aa18.23■□□□□ 0.51
HDAC6-235ENST00000495515 C8AP07357 584 aa18.23■□□□□ 0.51
HDAC6-235ENST00000495515 HNRNPA1P09651 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
HDAC6-235ENST00000495515 PTPN1P18031 435 aaKnown RBP18.23■□□□□ 0.51
HDAC6-235ENST00000495515 TUFMP49411 452 aaKnown RBP18.23■□□□□ 0.51
HDAC6-235ENST00000495515 PSMC1P62191 440 aaKnown RBP18.23■□□□□ 0.51
HDAC6-235ENST00000495515 RBM10P98175 930 aaKnown RBP18.23■□□□□ 0.51
HDAC6-235ENST00000495515 PPM1LQ5SGD2 360 aa18.23■□□□□ 0.51
HDAC6-235ENST00000495515 SMYD5Q6GMV2 418 aa18.23■□□□□ 0.51
HDAC6-235ENST00000495515 FAM171BQ6P995 826 aa18.23■□□□□ 0.51
HDAC6-235ENST00000495515 RRAGAQ7L523 313 aa18.23■□□□□ 0.51
HDAC6-235ENST00000495515 LRRTM3Q86VH5 581 aa18.23■□□□□ 0.51
HDAC6-235ENST00000495515 SPATA2LQ8IUW3 424 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-235ENST00000495515 B3GALNT2Q8NCR0 500 aa18.23■□□□□ 0.51
HDAC6-235ENST00000495515 MYCBPAPQ8TBZ2 947 aa18.23■□□□□ 0.51
HDAC6-235ENST00000495515 FUBP3Q96I24 572 aaKnown RBP eCLIP18.23■□□□□ 0.51
HDAC6-235ENST00000495515 PGLYRP2Q96PD5 576 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms