RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 EIF3CQ99613 913 aaKnown RBP16.71■□□□□ 0.27
PHF1-211ENST00000495509 ZBED2Q9BTP6 218 aa16.71■□□□□ 0.27
PHF1-211ENST00000495509 SEPT11Q9NVA2 429 aaKnown RBP16.71■□□□□ 0.27
PHF1-211ENST00000495509 TRMT1Q9NXH9 659 aaKnown RBP16.71■□□□□ 0.27
PHF1-211ENST00000495509 TAS2R14Q9NYV8 317 aa16.71■□□□□ 0.27
PHF1-211ENST00000495509 STXBP5LQ9Y2K9 1186 aa16.71■□□□□ 0.27
PHF1-211ENST00000495509 VWA8A3KMH1 1905 aa16.7■□□□□ 0.26
PHF1-211ENST00000495509 USP27XA6NNY8 438 aa16.7■□□□□ 0.26
PHF1-211ENST00000495509 PAEPP09466 180 aa16.7■□□□□ 0.26
PHF1-211ENST00000495509 ODC1P11926 461 aa16.7■□□□□ 0.26
PHF1-211ENST00000495509 HTRA4P83105 476 aaPredicted RBP16.7■□□□□ 0.26
PHF1-211ENST00000495509 SPOUT1Q5T280 376 aaKnown RBP16.7■□□□□ 0.26
PHF1-211ENST00000495509 KIAA0319Q5VV43 1072 aa16.7■□□□□ 0.26
PHF1-211ENST00000495509 TAS1R1Q7RTX1 841 aa16.7■□□□□ 0.26
PHF1-211ENST00000495509 HERC6Q8IVU3 1022 aa16.7■□□□□ 0.26
PHF1-211ENST00000495509 CMTR2Q8IYT2 770 aaKnown RBP16.7■□□□□ 0.26
PHF1-211ENST00000495509 FAM124BQ9H5Z6 455 aaPredicted RBP16.7■□□□□ 0.26
PHF1-211ENST00000495509 TMCO5BA8MYB1 307 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 LCA5LO95447 670 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 CYP11A1P05108 521 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 ATP2A2P16615 1042 aaKnown RBP16.69■□□□□ 0.26
PHF1-211ENST00000495509 TKTP29401 623 aaKnown RBP16.69■□□□□ 0.26
PHF1-211ENST00000495509 BMS1Q14692 1282 aaKnown RBP16.69■□□□□ 0.26
PHF1-211ENST00000495509 KCNT2Q6UVM3 1135 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 UNC93AQ86WB7 457 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 PASD1Q8IV76 773 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 TMEM86AQ8N2M4 240 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 TTC39CQ8N584 583 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 RTP3Q9BQQ7 232 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 DDX43Q9NXZ2 648 aaKnown RBP16.69■□□□□ 0.26
PHF1-211ENST00000495509 NAGPAQ9UK23 515 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 NENFQ9UMX5 172 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 PPP2R2CQ9Y2T4 447 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 RCCD1A6NED2 376 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 ABL1P00519 1130 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 FAM163BP0C2L3 166 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 PSMC1P62191 440 aaKnown RBP16.69■□□□□ 0.26
PHF1-211ENST00000495509 SHHQ15465 462 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 CCDC122Q5T0U0 273 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 RASIP1Q5U651 963 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 FAM171A1Q5VUB5 890 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 ALKBH5Q6P6C2 394 aaKnown RBP16.69■□□□□ 0.26
PHF1-211ENST00000495509 VPS36Q86VN1 386 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 CRYBG2Q8N1P7 616 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 CYFIP2Q96F07 1278 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 FAM49BQ9NUQ9 324 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 PCDHB8Q9UN66 801 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 PCDHA13Q9Y5I0 950 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 TSC2P49815 1807 aa16.69■□□□□ 0.26
PHF1-211ENST00000495509 LCHNA4D1U4 455 aa16.68■□□□□ 0.26
PHF1-211ENST00000495509 PAX3P23760 479 aa16.68■□□□□ 0.26
PHF1-211ENST00000495509 LHX1P48742 406 aa16.68■□□□□ 0.26
PHF1-211ENST00000495509 SPA17Q15506 151 aa16.68■□□□□ 0.26
PHF1-211ENST00000495509 FAM109BQ6ICB4 259 aaPredicted RBP16.68■□□□□ 0.26
PHF1-211ENST00000495509 FUT10Q6P4F1 479 aa16.68■□□□□ 0.26
PHF1-211ENST00000495509 CEP57Q86XR8 500 aa16.68■□□□□ 0.26
PHF1-211ENST00000495509 ZNF677Q86XU0 584 aa16.68■□□□□ 0.26
PHF1-211ENST00000495509 VN1R3Q9BXE9 311 aa16.68■□□□□ 0.26
PHF1-211ENST00000495509 PACSIN1Q9BY11 444 aa16.68■□□□□ 0.26
PHF1-211ENST00000495509 INSL6Q9Y581 213 aa16.68■□□□□ 0.26
PHF1-211ENST00000495509 GRXCR1A8MXD5 290 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 TRAPPC3O43617 180 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 VDRP11473 427 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 PTPN1P18031 435 aaKnown RBP16.67■□□□□ 0.26
PHF1-211ENST00000495509 RABGGTBP53611 331 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 SGO2Q562F6 1265 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 PPP1R26Q5T8A7 1209 aaPredicted RBP16.67■□□□□ 0.26
PHF1-211ENST00000495509 OVOS1Q6IE37 1185 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 DENND1BQ6P3S1 775 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 METTL23Q86XA0 190 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 REXO1L1PQ8IX06 675 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 CCAR2Q8N163 923 aaKnown RBP16.67■□□□□ 0.26
PHF1-211ENST00000495509 COLGALT1Q8NBJ5 622 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 PHOSPHO2Q8TCD6 241 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 IGSF21Q96ID5 467 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 TMEM209Q96SK2 561 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 SLC9A7Q96T83 725 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 RAD9AQ99638 391 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 PDCL3Q9H2J4 239 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 KIAA1671Q9BY89 1806 aa16.67■□□□□ 0.26
PHF1-211ENST00000495509 O00370 1275 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 TLL1O43897 1013 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 CCDC175P0C221 793 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 LINC00271P0C7V0 271 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 CCDC130P13994 396 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 TYMPP19971 482 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 ANXA13P27216 316 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 MAGEA1P43355 309 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 CNGA2Q16280 664 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 SMYD5Q6GMV2 418 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 SLC39A11Q8N1S5 342 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 FIBCD1Q8N539 461 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 WDTC1Q8N5D0 677 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 B3GALNT2Q8NCR0 500 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 CPA5Q8WXQ8 436 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 ZNF558Q96NG5 402 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 LACRTQ9GZZ8 138 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 CRTAC1Q9NQ79 661 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 DSEQ9UL01 958 aa16.66■□□□□ 0.26
PHF1-211ENST00000495509 SF3B1O75533 1304 aaKnown RBP eCLIP16.66■□□□□ 0.262e-11■■■■■ 44.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms