RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 MS4A14Q96JA4 679 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 WNT8AQ9H1J5 351 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 MRPL47Q9HD33 250 aaKnown RBP12.2□□□□□ -0.46
HDLBP-245ENST00000494862 STARD7Q9NQZ5 370 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 SLC38A7Q9NVC3 462 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 GDAP2Q9NXN4 497 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 HMGXB4Q9UGU5 601 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 ANAPC7Q9UJX3 599 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 SNX9Q9Y5X1 595 aa12.2□□□□□ -0.46
HDLBP-245ENST00000494862 KBTBD13C9JR72 458 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 ARVCFO00192 962 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 CEP104O60308 925 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 MICAL2O94851 1124 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 FAM163BP0C2L3 166 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 SKIP12755 728 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 SLC1A1P43005 524 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 SOX4Q06945 474 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-245ENST00000494862 C2orf54Q08AI8 447 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 MAMLD1Q13495 774 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 PTPROQ16827 1216 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 SGO2Q562F6 1265 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 ZNF618Q5T7W0 954 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 LIMS2Q7Z4I7 341 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 ERICH1Q86X53 443 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 UBL4BQ8N7F7 174 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 CD101Q93033 1021 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 PGBD4Q96DM1 585 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 BTBD6Q96KE9 485 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 HEXIM2Q96MH2 286 aaKnown RBP12.19□□□□□ -0.46
HDLBP-245ENST00000494862 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.19□□□□□ -0.462e-12■□□□□ 9.2
HDLBP-245ENST00000494862 MRPL45Q9BRJ2 306 aaKnown RBP12.19□□□□□ -0.46
HDLBP-245ENST00000494862 OSBPL7Q9BZF2 842 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 DNAI2Q9GZS0 605 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 TRPV6Q9H1D0 765 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 CARD9Q9H257 536 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 EPC1Q9H2F5 836 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 ANKZF1Q9H8Y5 726 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 RNF19AQ9NV58 838 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 PARVAQ9NVD7 372 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 ARGLU1Q9NWB6 273 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-245ENST00000494862 SMARCAL1Q9NZC9 954 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 EHD2Q9NZN4 543 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 LCMT1Q9UIC8 334 aa12.19□□□□□ -0.46
HDLBP-245ENST00000494862 TTC7AQ9ULT0 858 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-245ENST00000494862 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDLBP-245ENST00000494862 TARSL2A2RTX5 802 aaKnown RBP12.18□□□□□ -0.46
HDLBP-245ENST00000494862 KPNA7A9QM74 516 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 MYO1FO00160 1098 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 PGRMC1O00264 195 aaKnown RBP12.18□□□□□ -0.46
HDLBP-245ENST00000494862 O00370 1275 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 SPOPO43791 374 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 MGEA5O60502 916 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 PROSCO94903 275 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 CKBP12277 381 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 RBM10P98175 930 aaKnown RBP12.18□□□□□ -0.46
HDLBP-245ENST00000494862 TAP1Q03518 808 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 ORC1Q13415 861 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 BRD3Q15059 726 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 CLUL1Q15846 466 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 SOWAHAQ2M3V2 549 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 CCDC70Q6NSX1 233 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 DNAJC24Q6P3W2 148 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 FBXO38Q6PIJ6 1188 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 TRAF7Q6Q0C0 670 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 LCLAT1Q6UWP7 414 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 AGMOQ6ZNB7 445 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 DPH6Q7L8W6 267 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 PHLDB2Q86SQ0 1253 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 PDCL2Q8N4E4 241 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 FEZF2Q8TBJ5 459 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 SH3TC2Q8TF17 1288 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 GAD1Q99259 594 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 BEGAINQ9BUH8 593 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 PARD6BQ9BYG5 372 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 UBN1Q9NPG3 1134 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 RAB21Q9UL25 225 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 STRIP2Q9ULQ0 834 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 PTPN22Q9Y2R2 807 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 PCDHA3Q9Y5H8 950 aa12.18□□□□□ -0.46
HDLBP-245ENST00000494862 A0A0U1RQF3 1178 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 TCRBV5S1A1TA0A578 114 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 CCDC66A2RUB6 948 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 MEIS3P2A8K0S8 358 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 DNM1LO00429 736 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 SPTLC1O15269 473 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 THP07101 528 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 RHOXF2BP0C7M4 288 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 MAN1A1P33908 653 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 CTNNA1P35221 906 aaKnown RBP12.17□□□□□ -0.46
HDLBP-245ENST00000494862 MLH1P40692 756 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 PEX5P50542 639 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 CDK7P50613 346 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 GSCP56915 257 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-245ENST00000494862 PTPN20Q4JDL3 420 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 GLE1Q53GS7 698 aaKnown RBP12.17□□□□□ -0.46
HDLBP-245ENST00000494862 C2CD6Q53TS8 623 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 ARHGAP17Q68EM7 881 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 LLGL2Q6P1M3 1020 aa12.17□□□□□ -0.46
HDLBP-245ENST00000494862 MTERF4Q7Z6M4 381 aaKnown RBP12.17□□□□□ -0.46
HDLBP-245ENST00000494862 TOP6BLQ8N6T0 577 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms