RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 CDC45O75419 566 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 CHRM2P08172 466 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 KCNA2P16389 499 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 PCSK1P29120 753 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 THBS3P49746 956 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 RPS7P62081 194 aaKnown RBP2.72□□□□□ -1.97
PTPN12-212ENST00000494248 MTM1Q13496 603 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 LRRC41Q15345 812 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 CCDC174Q6PII3 467 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.72□□□□□ -1.97
PTPN12-212ENST00000494248 CLNKQ7Z7G1 428 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 NRACQ8N912 160 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 TOR1AIP2Q8NFQ8 470 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 MYCBPAPQ8TBZ2 947 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 TBC1D15Q8TC07 691 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 SECISBP2LQ93073 1101 aaKnown RBP2.72□□□□□ -1.97
PTPN12-212ENST00000494248 RUNDC1Q96C34 613 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 MFSD3Q96ES6 412 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 SLC39A13Q96H72 371 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 MPHOSPH6Q99547 160 aaKnown RBP2.72□□□□□ -1.97
PTPN12-212ENST00000494248 TTC1Q99614 292 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 MYOCQ99972 504 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 IFT22Q9H7X7 185 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 HOMER2Q9NSB8 354 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 FANCLQ9NW38 375 aa2.72□□□□□ -1.97
PTPN12-212ENST00000494248 TUBA8Q9NY65 449 aaPredicted RBP2.72□□□□□ -1.97
PTPN12-212ENST00000494248 THRAP3Q9Y2W1 955 aaKnown RBP2.72□□□□□ -1.97
PTPN12-212ENST00000494248 TCRBV7S2A1N4TA0A589 114 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 KCNU1A8MYU2 1149 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 TIMM44O43615 452 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 GPR32O75388 356 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 URI1O94763 535 aaPredicted RBP2.71□□□□□ -1.98
PTPN12-212ENST00000494248 ALPLP05186 524 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 KRT18P05783 430 aaKnown RBP2.71□□□□□ -1.98
PTPN12-212ENST00000494248 MYL1P05976 194 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 VDRP11473 427 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 BPIP17213 487 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 DRD4P21917 467 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 MT3P25713 68 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 MMP13P45452 471 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 SLC6A9P48067 706 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 HNRNPMP52272 730 aaKnown RBP eCLIP2.71□□□□□ -1.98
PTPN12-212ENST00000494248 SLC5A3P53794 718 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 FAM193AP78312 1265 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 ITIH3Q06033 890 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 ZNF844Q08AG5 666 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 MGAT2Q10469 447 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 BRD3Q15059 726 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 PPP2R5AQ15172 486 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 DHCR24Q15392 516 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 MUM1Q2TAK8 710 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 TMPRSS9Q7Z410 1059 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 KIAA0907Q7Z7F0 614 aaPredicted RBP2.71□□□□□ -1.98
PTPN12-212ENST00000494248 PDILTQ8N807 584 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 C1orf131Q8NDD1 294 aaKnown RBP2.71□□□□□ -1.98
PTPN12-212ENST00000494248 SVIPQ8NHG7 77 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 CCHCR1Q8TD31 782 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 TMEM125Q96AQ2 219 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 ORAI2Q96SN7 254 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 TMEM79Q9BSE2 394 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 PRSS22Q9GZN4 317 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 ZHX3Q9H4I2 956 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 LDAHQ9H6V9 325 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 MANSC1Q9H8J5 431 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 ARNT2Q9HBZ2 717 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 CTTNBP2NLQ9P2B4 639 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 MAPRE3Q9UPY8 281 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 ACTL7AQ9Y615 435 aa2.71□□□□□ -1.98
PTPN12-212ENST00000494248 RPGRIP1LQ68CZ1 1315 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 SMIM35A0A1B0GVV1 85 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 MYMKA6NI61 221 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 FAM171A2A8MVW0 826 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 KIAA0391O15091 583 aaKnown RBP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 KRT86O43790 486 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 HAUS5O94927 633 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 HNRNPCP07910 306 aaKnown RBP eCLIP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 MYCLP1P12525 358 aaPredicted RBP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 MCAMP43121 646 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 MASP1P48740 699 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 ANXA11P50995 505 aaKnown RBP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 EPHB1P54762 984 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 SCAND1P57086 179 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 NXPH1P58417 271 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 ATP8B2P98198 1209 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 MALLQ13021 153 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 DYRK1AQ13627 763 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 ERV3-1Q14264 604 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 KRT81Q14533 505 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 HLXQ14774 488 aaPredicted RBP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 NFE2Q16621 373 aaPredicted RBP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 TKFCQ3LXA3 575 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 DALRD3Q5D0E6 543 aaKnown RBP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 SYCP2LQ5T4T6 812 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 L1TD1Q5T7N2 865 aaKnown RBP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 CASC1Q6TDU7 716 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 KCNK18Q7Z418 384 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 WDR75Q8IWA0 830 aaKnown RBP2.7□□□□□ -1.98
PTPN12-212ENST00000494248 ADGRG5Q8IZF4 528 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 PAF1Q8N7H5 531 aa2.7□□□□□ -1.98
PTPN12-212ENST00000494248 CLRN3Q8NCR9 226 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms