RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 PCED1AQ9H1Q7 454 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 PRDM12Q9H4Q4 367 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 SLC2A4RGQ9NR83 387 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 GABBR1Q9UBS5 961 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 UBN2Q6ZU65 1347 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 TRPM7Q96QT4 1865 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 KAT6BQ8WYB5 2073 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 GPR75-ASB3A0A0A6YYF3 556 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 STX6O43752 255 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 ATF7P17544 494 aaPredicted RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 FNTBP49356 437 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 RCAN1P53805 252 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 IGBP1P78318 339 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 MAP3K12Q12852 859 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 TUBB2AQ13885 445 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 ASTE1Q2TB18 679 aaPredicted RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 PLEKHG6Q3KR16 790 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 PREPLQ4J6C6 727 aaPredicted RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 TTC38Q5R3I4 469 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 SOGA3Q5TF21 947 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 TRAPPC11Q7Z392 1133 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 C7orf31Q8N865 590 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 NAP1L5Q96NT1 182 aaPredicted RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 GPR101Q96P66 508 aaPredicted RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 FDXACB1Q9BRP7 624 aaPredicted RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 MMTAG2Q9BU76 263 aaKnown RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 TUBB2BQ9BVA1 445 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 GPR108Q9NPR9 543 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 DDX19AQ9NUU7 478 aaKnown RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 NRBP1Q9UHY1 535 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 CNPY2Q9Y2B0 182 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 ASB3Q9Y575 518 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 MYH11P35749 1972 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 SCN8AQ9UQD0 1980 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 MROH7Q68CQ1 1323 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 UBE2QL1A1L167 161 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 CCDC151A5D8V7 595 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 BTNL10A8MVZ5 291 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 CAPN14A8MX76 684 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 CES2O00748 559 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZNF202O95125 648 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 PRLRP16471 622 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 IBSPP21815 317 aaPredicted RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 TUBB4BP68371 445 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 PTH1RQ03431 593 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 RRP1BQ14684 758 aaKnown RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 NPY5RQ15761 445 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 KIAA0753Q2KHM9 967 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 ADCK5Q3MIX3 580 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 CCDC30Q5VVM6 783 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 SGMS1Q86VZ5 419 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 RABGGTAQ92696 567 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 GCDHQ92947 438 aaPredicted RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 PANX2Q96RD6 677 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 MEIS3Q99687 375 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 BRINP2Q9C0B6 783 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 HAPLN2Q9GZV7 340 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 IL23AQ9NPF7 189 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 ATP8A2Q9NTI2 1148 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 POLR3BQ9NW08 1133 aaPredicted RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 CEP72Q9P209 647 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 NCDNQ9UBB6 729 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZNF215Q9UL58 517 aaPredicted RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 G3BP2Q9UN86 482 aaKnown RBP2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 SPO11Q9Y5K1 396 aa2.88□□□□□ -1.95
CDC42EP3-205ENST00000494083 MYO16Q9Y6X6 1858 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 SNED1Q8TER0 1413 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 PSMD14O00487 310 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 RPS6KB1P23443 525 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 GPTP24298 496 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 SLC25A3Q00325 362 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 MIIPQ5JXC2 388 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 C1QL3Q5VWW1 255 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 ICE2Q659A1 982 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 STOX1Q6ZVD7 989 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZSCAN31Q96LW9 406 aaPredicted RBP2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 WDR92Q96MX6 357 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 DIAPH3Q9NSV4 1193 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 ING3Q9NXR8 418 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 CHPF2Q9P2E5 772 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 THRAP3Q9Y2W1 955 aaKnown RBP2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 SBF1O95248 1867 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 STRNO43815 780 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 OPHN1O60890 802 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 PEX14O75381 377 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 F2P00734 622 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 CLEC2LP0C7M8 214 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 CASQ1P31415 396 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 ADCYAP1R1P41586 468 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 GDF5P43026 501 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 SCNN1GP51170 649 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 CRHR2Q13324 411 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 FOXE3Q13461 319 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 RIPK1Q13546 671 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZNF174Q15697 407 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 DGKDQ16760 1214 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 GALNTL6Q49A17 601 aa2.87□□□□□ -1.95
CDC42EP3-205ENST00000494083 HSP90AB2PQ58FF8 381 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms