RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 Q7L0L9 218 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 APTXQ7Z2E3 356 aaKnown RBP8.11□□□□□ -1.11
VEGFA-214ENST00000493786 CACNA2D4Q7Z3S7 1137 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 LIMS2Q7Z4I7 341 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 RBM23Q86U06 439 aaKnown RBP8.11□□□□□ -1.11
VEGFA-214ENST00000493786 FMNL3Q8IVF7 1028 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 ARHGEF19Q8IW93 802 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 KBTBD7Q8WVZ9 684 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 IQCDQ96DY2 449 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 NAP1L5Q96NT1 182 aaPredicted RBP8.11□□□□□ -1.11
VEGFA-214ENST00000493786 ARID3AQ99856 593 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 NUP58Q9BVL2 599 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 NT5C1AQ9BXI3 368 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 XPO4Q9C0E2 1151 aaKnown RBP8.11□□□□□ -1.11
VEGFA-214ENST00000493786 RXFP1Q9HBX9 757 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 CISHQ9NSE2 258 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 DNAJC12Q9UKB3 198 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 STXBP5LQ9Y2K9 1186 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 PCDHB4Q9Y5E5 795 aa8.11□□□□□ -1.11
VEGFA-214ENST00000493786 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.11□□□□□ -1.117e-11■□□□□ 9.1
VEGFA-214ENST00000493786 PRRG1O14668 218 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 NCK2O43639 380 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 CILPO75339 1184 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 UCHL3P15374 230 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 CD19P15391 556 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 ACAT1P24752 427 aaKnown RBP8.1□□□□□ -1.11
VEGFA-214ENST00000493786 POLR2FP61218 127 aaKnown RBP8.1□□□□□ -1.11
VEGFA-214ENST00000493786 PSMC1P62191 440 aaKnown RBP8.1□□□□□ -1.11
VEGFA-214ENST00000493786 INCA1Q0VD86 236 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 CAMK1Q14012 370 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 TRIM14Q14142 442 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 NR1I3Q14994 352 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 NFE2Q16621 373 aaPredicted RBP8.1□□□□□ -1.11
VEGFA-214ENST00000493786 ZNF394Q53GI3 561 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 TCEAL5Q5H9L2 206 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 LIN9Q5TKA1 542 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 TPGS2Q68CL5 300 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 SLC8B1Q6J4K2 584 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 PHLDB3Q6NSJ2 640 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 GJB7Q6PEY0 223 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 EP400NLQ6ZTU2 488 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 CCDC149Q6ZUS6 474 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 OSTM1Q86WC4 334 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 PALB2Q86YC2 1186 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 SPATA2LQ8IUW3 424 aaPredicted RBP8.1□□□□□ -1.11
VEGFA-214ENST00000493786 RBBP8NLQ8NC74 664 aaPredicted RBP8.1□□□□□ -1.11
VEGFA-214ENST00000493786 B3GALNT2Q8NCR0 500 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 ZNF397Q8NF99 534 aaPredicted RBP8.1□□□□□ -1.11
VEGFA-214ENST00000493786 C2orf15Q8WU43 125 aaKnown RBP8.1□□□□□ -1.11
VEGFA-214ENST00000493786 MYLIPQ8WY64 445 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 TMEM176AQ96HP8 235 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 HEXIM2Q96MH2 286 aaKnown RBP8.1□□□□□ -1.11
VEGFA-214ENST00000493786 KLHL5Q96PQ7 755 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 CDX2Q99626 313 aaPredicted RBP8.1□□□□□ -1.11
VEGFA-214ENST00000493786 CLSTN3Q9BQT9 956 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 MED10Q9BTT4 135 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 ZCWPW1Q9H0M4 648 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 SDCBP2Q9H190 292 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 IGFLR1Q9H665 355 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 SIX2Q9NPC8 291 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 CEP72Q9P209 647 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 MAFFQ9ULX9 164 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 SIK3Q9Y2K2 1263 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 PCDHB5Q9Y5E4 795 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 PCDHGC5Q9Y5F6 944 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 FHOD1Q9Y613 1164 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 MTCH2Q9Y6C9 303 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 SCN1AP35498 2009 aa8.1□□□□□ -1.11
VEGFA-214ENST00000493786 COL4A4P53420 1690 aaPredicted RBP8.09□□□□□ -1.11
VEGFA-214ENST00000493786 GOLGA6L6A8MZA4 724 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 PER2O15055 1255 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 TBC1D4O60343 1298 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 LILRB3O75022 631 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 CLASP2O75122 1294 aaKnown RBP8.09□□□□□ -1.11
VEGFA-214ENST00000493786 C1RP00736 705 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 PAEPP09466 180 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 OR4Q2P0C623 313 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 CCDC172P0C7W6 258 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 PTPN1P18031 435 aaKnown RBP8.09□□□□□ -1.11
VEGFA-214ENST00000493786 POU3F3P20264 500 aaPredicted RBP8.09□□□□□ -1.11
VEGFA-214ENST00000493786 LMO2P25791 158 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 STAT1P42224 750 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 KLK7P49862 253 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 SLC8A3P57103 927 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 BPIFB4P59827 614 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 ROR1Q01973 937 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 CYP27A1Q02318 531 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 APBA1Q02410 837 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 ADCY1Q08828 1119 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 KCNMA1Q12791 1236 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 GPR17Q13304 367 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 RAB33AQ14088 237 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 ADGRE1Q14246 886 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 DRAP1Q14919 205 aaPredicted RBP8.09□□□□□ -1.11
VEGFA-214ENST00000493786 SKIV2LQ15477 1246 aaKnown RBP8.09□□□□□ -1.11
VEGFA-214ENST00000493786 DUSP6Q16828 381 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 MDH1BQ5I0G3 518 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 SPECC1LQ69YQ0 1117 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 SMYD5Q6GMV2 418 aa8.09□□□□□ -1.11
VEGFA-214ENST00000493786 IQCEQ6IPM2 695 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms