RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 CCNG2Q16589 344 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 DENND1BQ6P3S1 775 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 NOTUMQ6P988 496 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 POLNQ7Z5Q5 900 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 SOCS4Q8WXH5 440 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 KAT2BQ92831 832 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 ARL8AQ96BM9 186 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 ATP6V1G3Q96LB4 118 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 MCEEQ96PE7 176 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 KATNAL1Q9BW62 490 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 OSBPL8Q9BZF1 889 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 TMBIM4Q9HC24 238 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 AGAP1Q9UPQ3 857 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 CITO14578 2027 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 SIGLEC16A6NMB1 481 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 KRT14P02533 472 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 MYZAPP0CAP1 466 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 DARSP14868 501 aaKnown RBP11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 RGS2P41220 211 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 INHBEP58166 350 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 RPL7AP62424 266 aaKnown RBP11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 PTK6Q13882 451 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 SLMAPQ14BN4 828 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 PPP1R7Q15435 360 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 LEKR1Q6ZMV7 388 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 CATSPER4Q7RTX7 472 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 CCDC50Q8IVM0 306 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 ATL2Q8NHH9 583 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 UBLCP1Q8WVY7 318 aaPredicted RBP11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 ART4Q93070 314 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 KIF12Q96FN5 646 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 ELOVL4Q9GZR5 314 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 TSPYL1Q9H0U9 437 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 IGF2BP3O00425 579 aaKnown RBP eCLIP11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 NUDT17P0C025 328 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 RALAP11233 206 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 CYP2C9P11712 490 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 HOXA11P31270 313 aaPredicted RBP11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 ACTN2P35609 894 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 FLT3P36888 993 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 RAP1GAPP47736 663 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 GABRB2P47870 512 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 YARSP54577 528 aaKnown RBP11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 PLTPP55058 493 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 ADAM17P78536 824 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 CAV1Q03135 178 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 LMNB2Q03252 620 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 ZNF252P-AS1Q0IIN9 211 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 CALCOCO2Q13137 446 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 KIZQ2M2Z5 673 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 PTPN20Q4JDL3 420 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 CEP85LQ5SZL2 805 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 CROCCP2Q86T23 111 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 FBXO25Q8TCJ0 367 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 SNX27Q96L92 541 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 APBA2Q99767 749 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 NPTXRO95502 500 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 IGHA2P01877 340 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 ITIH2P19823 946 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 PSEN2P49810 448 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 NFX1Q12986 1120 aaKnown RBP11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 ACAP1Q15027 740 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 AGBL2Q5U5Z8 902 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 DRICH1Q6PGQ1 229 aaPredicted RBP11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 C17orf99Q6UX52 265 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 KDM7AQ6ZMT4 941 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 LRRC52Q8N7C0 313 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 PABPC3Q9H361 631 aaKnown RBP11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 USTQ9Y2C2 406 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 ITGBL1O95965 494 aaPredicted RBP11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 ZNF157P51786 506 aaPredicted RBP11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 PMS2P54278 862 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 CDH8P55286 799 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 KRT17Q04695 432 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 ZNF844Q08AG5 666 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 BBOF1Q8ND07 529 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 C1orf54Q8WWF1 131 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 ZBTB9Q96C00 473 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 AP5M1Q9H0R1 490 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 EFR3BQ9Y2G0 817 aa11.41□□□□□ -0.58
PHACTR4-204ENST00000493669 O00370 1275 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 MICAL2O94851 1124 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 TJP3O95049 919 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 KRT3P12035 628 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 SSR1P43307 286 aaKnown RBP11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 ZBTB6Q15916 424 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 NME8Q8N427 588 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 BEST2Q8NFU1 509 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 CCHCR1Q8TD31 782 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 SLITRK1Q96PX8 696 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 TWNKQ96RR1 684 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 NT5C1AQ9BXI3 368 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 FAM49AQ9H0Q0 323 aaPredicted RBP11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 CHST7Q9NS84 486 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 FLRT1Q9NZU1 646 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 CNTN3Q9P232 1028 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 KRT1P04264 644 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 KRT7P08729 469 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 GNAT1P11488 350 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms