RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 TMEM175Q9BSA9 504 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 DDX23Q9BUQ8 820 aaKnown RBP6.63□□□□□ -1.35
NF1-215ENST00000493220 SLC28A3Q9HAS3 691 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 SP110Q9HB58 689 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 TRMT13Q9NUP7 481 aaKnown RBP6.63□□□□□ -1.35
NF1-215ENST00000493220 ANAPC5Q9UJX4 755 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 CDH9Q9ULB4 789 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 ZNF148Q9UQR1 794 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 RBM47A0AV96 593 aaKnown RBP6.63□□□□□ -1.35
NF1-215ENST00000493220 LRRIQ3A6PVS8 624 aaPredicted RBP6.63□□□□□ -1.35
NF1-215ENST00000493220 SGK1O00141 431 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 ZBTB39O15060 712 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 ATG7O95352 703 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 PON1P27169 355 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 ADCY8P40145 1251 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 C10orf120Q5SQS8 335 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 GLYCTKQ8IVS8 523 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 RHOT1Q8IXI2 618 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 FAM49BQ9NUQ9 324 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.63□□□□□ -1.35
NF1-215ENST00000493220 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.63□□□□□ -1.35
NF1-215ENST00000493220 ANKRD63C9JTQ0 380 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 GPD1P21695 349 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 CASC4Q6P4E1 433 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 KCNK18Q7Z418 384 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 CCDC25Q86WR0 208 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 CDKL3Q8IVW4 592 aaPredicted RBP6.63□□□□□ -1.35
NF1-215ENST00000493220 LRRC52Q8N7C0 313 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 PDZD8Q8NEN9 1154 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 CYP4F11Q9HBI6 524 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 PPANQ9NQ55 473 aaKnown RBP6.63□□□□□ -1.35
NF1-215ENST00000493220 SPTLC3Q9NUV7 552 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 INTUQ9ULD6 942 aa6.63□□□□□ -1.35
NF1-215ENST00000493220 ANKRD31Q8N7Z5 1873 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 DNAJC25-GNG10A0A024R161 153 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 PGRMC1O00264 195 aaKnown RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 CSDE1O75534 798 aaKnown RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 F9P00740 461 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 OXCT1P55809 520 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 MYL6P60660 151 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 GHRHRQ02643 423 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 GCNT1Q02742 428 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 TLE2Q04725 743 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 EHHADHQ08426 723 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 TUSC3Q13454 348 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 PABPC1LQ4VXU2 614 aaKnown RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 ITPRIPL1Q6GPH6 555 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 GDF6Q6KF10 455 aaPredicted RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 KLHL7Q8IXQ5 586 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 ZNF557Q8N988 423 aaPredicted RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 C18orf25Q96B23 403 aaPredicted RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 AGPAT5Q9NUQ2 364 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 PHF24Q9UPV7 400 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 FHOD1Q9Y613 1164 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 PPP1R12AO14974 1030 aaPredicted RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 MBL2P11226 248 aaPredicted RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 GFPT1Q06210 699 aaPredicted RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 RABGAP1LQ5R372 815 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 C6orf163Q5TEZ5 329 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 TRIM65Q6PJ69 517 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 SPATA24Q86W54 205 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 DNAJC19Q96DA6 116 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 MPP4Q96JB8 637 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 PI4K2AQ9BTU6 479 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 DMAP1Q9NPF5 467 aaPredicted RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 DYRK4Q9NR20 520 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.62□□□□□ -1.357e-7■□□□□ 8.6
NF1-215ENST00000493220 LMCD1Q9NZU5 365 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 NAGPAQ9UK23 515 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 TPX2Q9ULW0 747 aaKnown RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 BAZ2AQ9UIF9 1905 aaKnown RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 TTC26A0AVF1 554 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 EPHB1P54762 984 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 TPI1P60174 286 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 DEUP1Q05D60 604 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 FAM187BQ17R55 369 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 ANO4Q32M45 955 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 TRIM60Q495X7 471 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 SLC39A5Q6ZMH5 540 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 PHLDB2Q86SQ0 1253 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 DDX42Q86XP3 938 aaKnown RBP eCLIP6.62□□□□□ -1.35
NF1-215ENST00000493220 HASPINQ8TF76 798 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 PAWRQ96IZ0 340 aaKnown RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 C11orf84Q9BUA3 381 aaPredicted RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 FAM107BQ9H098 131 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 A0A1B0GUL6 1792 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 A0A087X0B3 334 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 APOL1O14791 398 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 PSMD3O43242 534 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 AKAP3O75969 853 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 ZBED1O96006 694 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 CKBP12277 381 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 GLUD2P49448 558 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 MDM2Q00987 491 aaPredicted RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 DNAJC21Q5F1R6 531 aaKnown RBP6.62□□□□□ -1.35
NF1-215ENST00000493220 UNC45BQ8IWX7 931 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 ATP6V1E2Q96A05 226 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 CYFIP2Q96F07 1278 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 PTPN18Q99952 460 aa6.62□□□□□ -1.35
NF1-215ENST00000493220 MMTAG2Q9BU76 263 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms