RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 C2orf16Q68DN1 1984 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 A0A0C4DFX4 3053 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 TARSL2A2RTX5 802 aaKnown RBP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 GRXCR2A6NFK2 248 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 RNF225M0QZC1 329 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 ADAM12O43184 909 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 KRT86O43790 486 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 PHACTR2O75167 634 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 IPO7O95373 1038 aaKnown RBP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 LDHAP00338 332 aaKnown RBP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 IL9P15248 144 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 CYP3A5P20815 502 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 FGFR3P22607 806 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 EEF1GP26641 437 aaKnown RBP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 CLCN4P51793 760 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 POU5F1Q01860 360 aaKnown RBP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 KCNB1Q14721 858 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 TMEM132DQ14C87 1099 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 TJAP1Q5JTD0 557 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 CCDC122Q5T0U0 273 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 KIAA1841Q6NSI8 718 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 SYCE2Q6PIF2 218 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 RSPO2Q6UXX9 243 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 ZNF662Q6ZS27 426 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 RDH13Q8NBN7 331 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 FBXL18Q96ME1 805 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 DNAJC7Q99615 494 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 CHP1Q99653 195 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 TTPALQ9BTX7 342 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 APOL5Q9BWW9 433 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 RBAKQ9NYW8 714 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-219ENST00000491747 CDH22Q9UJ99 828 aa10.08□□□□□ -0.8
BRCA1-219ENST00000491747 PTPRJQ12913 1337 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 LGALS16A8MUM7 142 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 TULP1O00294 542 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-219ENST00000491747 TRIM66O15016 1216 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 KLRC2P26717 231 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 CYP2J2P51589 502 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 STIM1Q13586 685 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 PAPD7Q5XG87 772 aaKnown RBP10.07□□□□□ -0.8
BRCA1-219ENST00000491747 ANKRD54Q6NXT1 300 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 NECAB3Q96P71 396 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-219ENST00000491747 TSPAN18Q96SJ8 248 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 CLSTN3Q9BQT9 956 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 S1PR5Q9H228 398 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 RSPH14Q9UHP6 348 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 DERAQ9Y315 318 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 ANO9A1A5B4 782 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 PIRO00625 290 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 SPTLC1O15269 473 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 MBTPS2O43462 519 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 RNF40O75150 1001 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 IL18RAPO95256 599 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 SPATA31D3P0C874 917 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 CYLC1P35663 651 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-219ENST00000491747 PRCPP42785 496 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 C9orf57Q5W0N0 161 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 LMBRD2Q68DH5 695 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-219ENST00000491747 IQCEQ6IPM2 695 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 PTCRAQ6ISU1 281 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-219ENST00000491747 SPATA31D4Q6ZUB0 917 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 PALB2Q86YC2 1186 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 C12orf56Q8IXR9 622 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 C12orf76Q8N812 135 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-219ENST00000491747 PIK3R5Q8WYR1 880 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 EMILIN2Q9BXX0 1053 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 DPP3Q9NY33 737 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 FNIP2Q9P278 1114 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 MAGEC2Q9UBF1 373 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-219ENST00000491747 CD207Q9UJ71 328 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 CAPN11Q9UMQ6 739 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 REXO2Q9Y3B8 237 aaKnown RBP10.07□□□□□ -0.8
BRCA1-219ENST00000491747 C2CD2Q9Y426 696 aa10.07□□□□□ -0.8
BRCA1-219ENST00000491747 PES1O00541 588 aaKnown RBP10.06□□□□□ -0.8
BRCA1-219ENST00000491747 ENC1O14682 589 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 KIAA0391O15091 583 aaKnown RBP10.06□□□□□ -0.8
BRCA1-219ENST00000491747 ELAVL2Q12926 359 aaKnown RBP10.06□□□□□ -0.8
BRCA1-219ENST00000491747 PSMD5Q16401 504 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 AAK1Q2M2I8 961 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 CCDC70Q6NSX1 233 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 KIAA1328Q86T90 577 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 SMRP1Q8NCR6 262 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 BEST2Q8NFU1 509 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 CXorf38Q8TB03 319 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 SUSD3Q96L08 255 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 NUP58Q9BVL2 599 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 COL25A1Q9BXS0 654 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-219ENST00000491747 THAP9Q9H5L6 903 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 DMAC2Q9NW81 257 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 ZNHIT6Q9NWK9 470 aaKnown RBP10.06□□□□□ -0.8
BRCA1-219ENST00000491747 SSX2IPQ9Y2D8 614 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 NUB1Q9Y5A7 615 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 ZNF233A6NK53 670 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 PSMA7O14818 248 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 XPOTO43592 962 aaKnown RBP10.06□□□□□ -0.8
BRCA1-219ENST00000491747 SNRPFP62306 86 aaKnown RBP10.06□□□□□ -0.8
BRCA1-219ENST00000491747 MRPL58Q14197 206 aaKnown RBP10.06□□□□□ -0.8
BRCA1-219ENST00000491747 SNRNP35Q16560 246 aaKnown RBP10.06□□□□□ -0.8
BRCA1-219ENST00000491747 LILRA6Q6PI73 481 aa10.06□□□□□ -0.8
BRCA1-219ENST00000491747 GPR65Q8IYL9 337 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms