RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	CHFR	Q96EP1	664 aa		20.9	■□□□□ 0.94
CDK5RAP2-218	ENST00000491334	NTPCR	Q9BSD7	190 aa	Known RBP	20.9	■□□□□ 0.94
CDK5RAP2-218	ENST00000491334	KIF9	Q9HAQ2	790 aa		20.9	■□□□□ 0.94
CDK5RAP2-218	ENST00000491334	TDP1	Q9NUW8	608 aa		20.9	■□□□□ 0.94
CDK5RAP2-218	ENST00000491334	DNM3	Q9UQ16	869 aa		20.9	■□□□□ 0.94
CDK5RAP2-218	ENST00000491334	STK24	Q9Y6E0	443 aa		20.9	■□□□□ 0.94
CDK5RAP2-218	ENST00000491334	NUP210	Q8TEM1	1887 aa	Predicted RBP	20.9	■□□□□ 0.94
CDK5RAP2-218	ENST00000491334	ABCA7	Q8IZY2	2146 aa		20.89	■□□□□ 0.94
CDK5RAP2-218	ENST00000491334	EML5	Q05BV3	1969 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	SLC16A4	O15374	487 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	CXCL8	P10145	99 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	ODC1	P11926	461 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	DDX6	P26196	483 aa	Known RBP eCLIP	20.89	■□□□□ 0.93	3e-10	■□□□□ 8.1
CDK5RAP2-218	ENST00000491334	IRX4	P78413	519 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	PDGFRL	Q15198	375 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	ANKRD1	Q15327	319 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	ZNF174	Q15697	407 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	PMS2CL	Q68D20	193 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	CYP2U1	Q7Z449	544 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	DAW1	Q8N136	415 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	MAB21L3	Q8N8X9	362 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	DEFB124	Q8NES8	71 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	USP13	Q92995	863 aa	Predicted RBP	20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	DDX19A	Q9NUU7	478 aa	Known RBP	20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	LRWD1	Q9UFC0	647 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	TBX20	Q9UMR3	447 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	INVS	Q9Y283	1065 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	MSRB2	Q9Y3D2	182 aa		20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	KIF26A	Q9ULI4	1882 aa	Predicted RBP	20.89	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	TTC26	A0AVF1	554 aa		20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	ARSA	P15289	507 aa		20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	MATR3	P43243	847 aa	Known RBP eCLIP	20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	MCL1	Q07820	350 aa		20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	LMAN2	Q12907	356 aa		20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	PSMD2	Q13200	908 aa		20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	SAFB	Q15424	915 aa	Known RBP eCLIP	20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	SLC39A12	Q504Y0	691 aa		20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	ZPBP2	Q6X784	338 aa		20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	TSTD1	Q8NFU3	115 aa		20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	GIPC2	Q8TF65	315 aa		20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	SENP8	Q96LD8	212 aa		20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	TSPAN18	Q96SJ8	248 aa		20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	CCL26	Q9Y258	94 aa		20.88	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	GJA4	P35212	333 aa		20.87	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	RDX	P35241	583 aa	Known RBP	20.87	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	FOSB	P53539	338 aa		20.87	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	SMTN	P53814	917 aa		20.87	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	LILRA4	P59901	499 aa		20.87	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	PPP2R3A	Q06190	1150 aa		20.87	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	SMARCB1	Q12824	385 aa		20.87	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	PDIA5	Q14554	519 aa		20.87	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	TMEM130	Q8N3G9	435 aa		20.87	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	CPA6	Q8N4T0	437 aa		20.87	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	C2orf15	Q8WU43	125 aa	Known RBP	20.87	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	CD101	Q93033	1021 aa		20.87	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	NBEA	Q8NFP9	2946 aa		20.87	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	PCNX2	A6NKB5	2137 aa		20.86	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	SFI1	A8K8P3	1242 aa		20.86	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	PATE3	B3GLJ2	98 aa		20.86	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	HYAL3	O43820	417 aa	Predicted RBP	20.86	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	ATF6	P18850	670 aa		20.86	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	FXR2	P51116	673 aa	Known RBP eCLIP	20.86	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	KYAT1	Q16773	422 aa		20.86	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	KIAA1211L	Q6NV74	962 aa		20.86	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	NECAB1	Q8N987	351 aa		20.86	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	SPIRE2	Q8WWL2	714 aa		20.86	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	PIGK	Q92643	395 aa		20.86	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	ECT2	Q9H8V3	914 aa		20.86	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	EVL	Q9UI08	416 aa	Predicted RBP	20.86	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	LACTBL1	A8MY62	500 aa		20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	TAF4	O00268	1085 aa		20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	F11	P03951	625 aa		20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	U2AF2	P26368	475 aa	Known RBP eCLIP	20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	DHPS	P49366	369 aa	Predicted RBP	20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	NLRP12	P59046	1061 aa		20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	NR1H3	Q13133	447 aa		20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	RINT1	Q6NUQ1	792 aa		20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	METTL23	Q86XA0	190 aa		20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	THEM5	Q8N1Q8	247 aa		20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	OR10T2	Q8NGX3	314 aa		20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	MRPS31	Q92665	395 aa	Known RBP	20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	TIPIN	Q9BVW5	301 aa		20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	NUSAP1	Q9BXS6	441 aa	Known RBP	20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	ZCWPW1	Q9H0M4	648 aa		20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	DSE	Q9UL01	958 aa		20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	ASCC3	Q8N3C0	2202 aa	Known RBP	20.85	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	NUP205	Q92621	2012 aa		20.84	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334		E9PMD0	336 aa		20.84	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	CYP11A1	P05108	521 aa		20.84	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	MAPK7	Q13164	816 aa		20.84	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	ZNF268	Q14587	947 aa	Predicted RBP	20.84	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	TXNDC8	Q6A555	127 aa		20.84	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	C1orf186	Q6ZWK4	172 aa		20.84	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	TMEM150A	Q86TG1	271 aa		20.84	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	MON1A	Q86VX9	555 aa		20.84	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	TMEM161B	Q8NDZ6	487 aa		20.84	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	NSUN7	Q8NE18	718 aa	Known RBP	20.84	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	SPPL2B	Q8TCT7	592 aa		20.84	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	SNX29	Q8TEQ0	813 aa		20.84	■□□□□ 0.93
CDK5RAP2-218	ENST00000491334	RAB34	Q9BZG1	259 aa		20.84	■□□□□ 0.93

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