RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 FOXD4L5Q5VV16 416 aaPredicted RBP22.6■■□□□ 1.21
SYNE4-205ENST00000490730 LRRTM3Q86VH5 581 aa22.6■■□□□ 1.21
SYNE4-205ENST00000490730 SPPL2BQ8TCT7 592 aa22.6■■□□□ 1.21
SYNE4-205ENST00000490730 C2orf15Q8WU43 125 aaKnown RBP22.6■■□□□ 1.21
SYNE4-205ENST00000490730 CACTINQ8WUQ7 758 aaKnown RBP22.6■■□□□ 1.21
SYNE4-205ENST00000490730 FOXD4L4Q8WXT5 416 aaPredicted RBP22.6■■□□□ 1.21
SYNE4-205ENST00000490730 BORCS6Q96GS4 357 aa22.6■■□□□ 1.21
SYNE4-205ENST00000490730 MORC2Q9Y6X9 1032 aaPredicted RBP22.6■■□□□ 1.21
SYNE4-205ENST00000490730 F5P12259 2224 aa22.59■■□□□ 1.21
SYNE4-205ENST00000490730 SLC38A8A6NNN8 435 aa22.59■■□□□ 1.21
SYNE4-205ENST00000490730 SPTLC2O15270 562 aa22.59■■□□□ 1.21
SYNE4-205ENST00000490730 EXTL3O43909 919 aa22.59■■□□□ 1.21
SYNE4-205ENST00000490730 CCNE1P24864 410 aa22.59■■□□□ 1.21
SYNE4-205ENST00000490730 TSPY1Q01534 308 aa22.59■■□□□ 1.21
SYNE4-205ENST00000490730 FZD5Q13467 585 aa22.59■■□□□ 1.21
SYNE4-205ENST00000490730 KIAA2013Q8IYS2 634 aa22.59■■□□□ 1.21
SYNE4-205ENST00000490730 C1orf127Q8N9H9 656 aa22.59■■□□□ 1.21
SYNE4-205ENST00000490730 LINC00301Q8NCQ3 95 aa22.59■■□□□ 1.21
SYNE4-205ENST00000490730 TTC8Q8TAM2 541 aa22.59■■□□□ 1.21
SYNE4-205ENST00000490730 ZNF396Q96N95 335 aaPredicted RBP22.59■■□□□ 1.21
SYNE4-205ENST00000490730 TMEM206Q9H813 350 aa22.59■■□□□ 1.21
SYNE4-205ENST00000490730 LMAN1LQ9HAT1 526 aa22.59■■□□□ 1.21
SYNE4-205ENST00000490730 TFIP11Q9UBB9 837 aaKnown RBP22.59■■□□□ 1.21
SYNE4-205ENST00000490730 CHADO15335 359 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 HUS1O60921 280 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 HAPLN1P10915 354 aaPredicted RBP22.58■■□□□ 1.21
SYNE4-205ENST00000490730 CDC25CP30307 473 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 SOX9P48436 509 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 SMARCB1Q12824 385 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 STXBP4Q6ZWJ1 553 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 PDCL2Q8N4E4 241 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 CSGALNACT2Q8N6G5 542 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 HPS3Q969F9 1004 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 ZFYVE19Q96K21 471 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 MKNK1Q9BUB5 465 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 PDE11AQ9HCR9 933 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 PCDHB5Q9Y5E4 795 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 PCDHGA2Q9Y5H1 932 aa22.58■■□□□ 1.21
SYNE4-205ENST00000490730 ARNTLO00327 626 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 PRAMEF12O95522 483 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 TMEM191BP0C7N4 346 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 ID4P47928 161 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 FCHO2Q0JRZ9 810 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 LMBRD2Q68DH5 695 aaPredicted RBP22.57■■□□□ 1.2
SYNE4-205ENST00000490730 ZNF687Q8N1G0 1237 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 GPD1LQ8N335 351 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 GLIS3Q8NEA6 775 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 RUBCNQ92622 972 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 DHX58Q96C10 678 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 PI4K2AQ9BTU6 479 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 MTMR12Q9C0I1 747 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 LRRC27Q9C0I9 530 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 SMG9Q9H0W8 520 aaKnown RBP22.57■■□□□ 1.2
SYNE4-205ENST00000490730 TNMDQ9H2S6 317 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 CHRDQ9H2X0 955 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 TASP1Q9H6P5 420 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 PRMT8Q9NR22 394 aaPredicted RBP22.57■■□□□ 1.2
SYNE4-205ENST00000490730 TMLHEQ9NVH6 421 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 ZSCAN32Q9NX65 697 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 ITGA11Q9UKX5 1188 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 L1RE1Q9UN81 338 aa22.57■■□□□ 1.2
SYNE4-205ENST00000490730 R3HCC1Q9Y3T6 440 aaKnown RBP22.57■■□□□ 1.2
SYNE4-205ENST00000490730 PRPF40AO75400 957 aaKnown RBP22.56■■□□□ 1.2
SYNE4-205ENST00000490730 ACAT1P24752 427 aaKnown RBP22.56■■□□□ 1.2
SYNE4-205ENST00000490730 ASIC1P78348 528 aa22.56■■□□□ 1.2
SYNE4-205ENST00000490730 FOXD4L6Q3SYB3 417 aaPredicted RBP22.56■■□□□ 1.2
SYNE4-205ENST00000490730 SCARA3Q6AZY7 606 aa22.56■■□□□ 1.2
SYNE4-205ENST00000490730 FOXD4L3Q6VB84 417 aaPredicted RBP22.56■■□□□ 1.2
SYNE4-205ENST00000490730 DCLK2Q8N568 766 aa22.56■■□□□ 1.2
SYNE4-205ENST00000490730 STKLD1Q8NE28 680 aa22.56■■□□□ 1.2
SYNE4-205ENST00000490730 LRRC3BQ96PB8 259 aa22.56■■□□□ 1.2
SYNE4-205ENST00000490730 IL21Q9HBE4 155 aa22.56■■□□□ 1.2
SYNE4-205ENST00000490730 DDX43Q9NXZ2 648 aaKnown RBP22.56■■□□□ 1.2
SYNE4-205ENST00000490730 MAGED2Q9UNF1 606 aaPredicted RBP22.56■■□□□ 1.2
SYNE4-205ENST00000490730 SNX9Q9Y5X1 595 aa22.56■■□□□ 1.2
SYNE4-205ENST00000490730 GPR15P49685 360 aa22.55■■□□□ 1.2
SYNE4-205ENST00000490730 RBP5P82980 135 aa22.55■■□□□ 1.2
SYNE4-205ENST00000490730 MYL7Q01449 175 aa22.55■■□□□ 1.2
SYNE4-205ENST00000490730 NFE2Q16621 373 aaPredicted RBP22.55■■□□□ 1.2
SYNE4-205ENST00000490730 ARHGAP29Q52LW3 1261 aa22.55■■□□□ 1.2
SYNE4-205ENST00000490730 LRRC52Q8N7C0 313 aa22.55■■□□□ 1.2
SYNE4-205ENST00000490730 SUMF1Q8NBK3 374 aa22.55■■□□□ 1.2
SYNE4-205ENST00000490730 NCDNQ9UBB6 729 aa22.55■■□□□ 1.2
SYNE4-205ENST00000490730 DMXL1Q9Y485 3027 aa22.55■■□□□ 1.2
SYNE4-205ENST00000490730 OTOGLQ3ZCN5 2332 aa22.54■■□□□ 1.2
SYNE4-205ENST00000490730 KIF26AQ9ULI4 1882 aaPredicted RBP22.54■■□□□ 1.2
SYNE4-205ENST00000490730 PPP6R2O75170 966 aa22.54■■□□□ 1.2
SYNE4-205ENST00000490730 HSP90AA1P07900 732 aaKnown RBP22.54■■□□□ 1.2
SYNE4-205ENST00000490730 PPP2R5DQ14738 602 aa22.54■■□□□ 1.2
SYNE4-205ENST00000490730 E2F4Q16254 413 aa22.54■■□□□ 1.2
SYNE4-205ENST00000490730 SDHAF4Q5VUM1 108 aa22.54■■□□□ 1.2
SYNE4-205ENST00000490730 ADGRF2Q8IZF7 708 aa22.54■■□□□ 1.2
SYNE4-205ENST00000490730 TMEM86AQ8N2M4 240 aa22.54■■□□□ 1.2
SYNE4-205ENST00000490730 BPIFB1Q8TDL5 484 aa22.54■■□□□ 1.2
SYNE4-205ENST00000490730 MSANTD3Q96H12 275 aa22.54■■□□□ 1.2
SYNE4-205ENST00000490730 ANKRD36BP1Q96IX9 119 aa22.54■■□□□ 1.2
SYNE4-205ENST00000490730 TRIM9Q9C026 710 aa22.54■■□□□ 1.2
SYNE4-205ENST00000490730 C8orf33Q9H7E9 229 aaPredicted RBP22.54■■□□□ 1.2
SYNE4-205ENST00000490730 OBP2AQ9NY56 170 aa22.54■■□□□ 1.2
SYNE4-205ENST00000490730 GTSE1Q9NYZ3 720 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms