RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 TNFSF13BQ9Y275 285 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 LRRC37A3O60309 1634 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 MMP3P08254 477 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 COMTP21964 271 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 MKRN4PQ13434 485 aaPredicted RBP15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 NT5DC4Q86YG4 428 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 ATPAF2Q8N5M1 289 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 TMEM161BQ8NDZ6 487 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 CLEC4DQ8WXI8 215 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 SYN2Q92777 582 aaPredicted RBP15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 SLC35C1Q96A29 364 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 TRIM56Q9BRZ2 755 aaKnown RBP15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 UNCXA6NJT0 531 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 RASGRF2O14827 1237 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 KRT14P02533 472 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 MMEP08473 750 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 SPATA31C1P0DKV0 1188 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 PAPOLAP51003 745 aaKnown RBP15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 KPNA2P52292 529 aaKnown RBP15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 PSMD6Q15008 389 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 E2F4Q16254 413 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 ELMO3Q96BJ8 720 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 SENP8Q96LD8 212 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 OSBPL8Q9BZF1 889 aa15.1■□□□□ 0.01
ARHGEF39-205ENST00000490638 CUL1Q13616 776 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 RRP1BQ14684 758 aaKnown RBP15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 PDLIM2Q96JY6 352 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 CDT1Q9H211 546 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 TOPAZ1Q8N9V7 1692 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 UMODL1Q5DID0 1318 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 CCDC151A5D8V7 595 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 KCNN4O15554 427 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 APLP1P51693 650 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 CASP5P51878 434 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 EFEMP1Q12805 493 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 CDH18Q13634 790 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 SH3D19Q5HYK7 790 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 CCDC62Q6P9F0 684 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 WHAMMQ8TF30 809 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 PARD6BQ9BYG5 372 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 CATSPERBQ9H7T0 1116 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 USP27XA6NNY8 438 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 ATP9BO43861 1147 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 CST8O60676 142 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 F9P00740 461 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 PLEKP08567 350 aaPredicted RBP15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 ATP6V0D2Q8N8Y2 350 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 GLIS3Q8NEA6 775 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 ALKBH8Q96BT7 664 aaKnown RBP15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 ZNF558Q96NG5 402 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 GOLPH3Q9H4A6 298 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 GTPBP10A4D1E9 387 aaKnown RBP15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 KRT37O76014 449 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 ATP1A1P05023 1023 aaKnown RBP15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 RBP3P10745 1247 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 HP1BP3Q5SSJ5 553 aaPredicted RBP15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 EEF1DP3Q658K8 133 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 LRRC8CQ8TDW0 803 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 MSRAQ9UJ68 235 aa15.09■□□□□ 0.01
ARHGEF39-205ENST00000490638 AFDNP55196 1824 aaKnown RBP15.08■□□□□ 0.01
ARHGEF39-205ENST00000490638 C3orf70A6NLC5 250 aaPredicted RBP15.08■□□□□ 0.01
ARHGEF39-205ENST00000490638 WNT7AO00755 349 aa15.08■□□□□ 0.01
ARHGEF39-205ENST00000490638 SARS2Q9NP81 518 aaKnown RBP15.08■□□□□ 0.01
ARHGEF39-205ENST00000490638 IRAK4Q9NWZ3 460 aa15.08■□□□□ 0.01
ARHGEF39-205ENST00000490638 SRRDQ9UH36 339 aa15.08■□□□□ 0.01
ARHGEF39-205ENST00000490638 SLC12A8A0AV02 714 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 TREHO43280 583 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 APRTP07741 180 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 ARSEP51690 589 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 SESN2P58004 480 aaPredicted RBP15.08■□□□□ 0
ARHGEF39-205ENST00000490638 SMAD1Q15797 465 aaKnown RBP15.08■□□□□ 0
ARHGEF39-205ENST00000490638 ANO4Q32M45 955 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 INTS9Q9NV88 658 aaKnown RBP15.08■□□□□ 0
ARHGEF39-205ENST00000490638 DDX20Q9UHI6 824 aaKnown RBP15.08■□□□□ 0
ARHGEF39-205ENST00000490638 PLIN4Q96Q06 1357 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 ESYT3A0FGR9 886 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 TKTL1P51854 596 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 GTF2BQ00403 316 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 GLE1Q53GS7 698 aaKnown RBP15.08■□□□□ 0
ARHGEF39-205ENST00000490638 SPDYE1Q8NFV5 336 aaPredicted RBP15.08■□□□□ 0
ARHGEF39-205ENST00000490638 ZNF606Q8WXB4 792 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 LPPQ93052 612 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 DNAJC19Q96DA6 116 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 THAP2Q9H0W7 228 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 TRIM10Q9UDY6 481 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 AMACRQ9UHK6 382 aa15.08■□□□□ 0
ARHGEF39-205ENST00000490638 KCNA2P16389 499 aa15.07■□□□□ 0
ARHGEF39-205ENST00000490638 SARSP49591 514 aaKnown RBP15.07■□□□□ 0
ARHGEF39-205ENST00000490638 IRX4P78413 519 aa15.07■□□□□ 0
ARHGEF39-205ENST00000490638 TWF1Q12792 350 aa15.07■□□□□ 0
ARHGEF39-205ENST00000490638 NOMO2Q5JPE7 1267 aa15.07■□□□□ 0
ARHGEF39-205ENST00000490638 SDE2Q6IQ49 451 aa15.07■□□□□ 0
ARHGEF39-205ENST00000490638 USP38Q8NB14 1042 aa15.07■□□□□ 0
ARHGEF39-205ENST00000490638 ATL2Q8NHH9 583 aa15.07■□□□□ 0
ARHGEF39-205ENST00000490638 FAM8A1Q9UBU6 413 aa15.07■□□□□ 0
ARHGEF39-205ENST00000490638 TACC3Q9Y6A5 838 aa15.07■□□□□ 0
ARHGEF39-205ENST00000490638 TTLL13PA6NNM8 815 aa15.07■□□□□ 0
ARHGEF39-205ENST00000490638 H0Y626 953 aa15.07■□□□□ 0
ARHGEF39-205ENST00000490638 B4GALT5O43286 388 aa15.07■□□□□ 0
ARHGEF39-205ENST00000490638 PCBP1Q15365 356 aaKnown RBP eCLIP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms