RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 SPEM1Q8N4L4 309 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 SUMF1Q8NBK3 374 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 CCDC26Q8TAB7 109 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 SHKBP1Q8TBC3 707 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 CSGALNACT1Q8TDX6 532 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 ING5Q8WYH8 240 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 FAM3CQ92520 227 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 TCEAL4Q96EI5 215 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 FUBP3Q96I24 572 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCT3-213ENST00000489870 MYRFLQ96LU7 910 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 ZNF396Q96N95 335 aaPredicted RBP10.29□□□□□ -0.76
CCT3-213ENST00000489870 GCNAQ96QF7 691 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 PLA2G2FQ9BZM2 168 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 FOXQ1Q9C009 403 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 EPC1Q9H2F5 836 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 KIF9Q9HAQ2 790 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 HEBP1Q9NRV9 189 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 EHD2Q9NZN4 543 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 R3HCC1Q9Y3T6 440 aaKnown RBP10.29□□□□□ -0.76
CCT3-213ENST00000489870 PCDHB5Q9Y5E4 795 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 CLIC4Q9Y696 253 aa10.29□□□□□ -0.76
CCT3-213ENST00000489870 CCDC163A0A0D9SF12 145 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 MYBPHLA2RUH7 354 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 MYMKA6NI61 221 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 HEPACAM2A8MVW5 462 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 PRR5-ARHGAP8B1AHC4 643 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 ARNTLO00327 626 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 EIF3DO15371 548 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCT3-213ENST00000489870 STX6O43752 255 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 HUS1O60921 280 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 PRPF40AO75400 957 aaKnown RBP10.28□□□□□ -0.76
CCT3-213ENST00000489870 VNN2O95498 520 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 YEATS4O95619 227 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 HAPLN1P10915 354 aaPredicted RBP10.28□□□□□ -0.76
CCT3-213ENST00000489870 TARSP26639 723 aaKnown RBP10.28□□□□□ -0.76
CCT3-213ENST00000489870 PCSK1P29120 753 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 STAT6P42226 847 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 ID4P47928 161 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 PDE6CP51160 858 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 RBP5P82980 135 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 ARHGAP8P85298 464 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 MYL7Q01449 175 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 MYO1EQ12965 1108 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 RESTQ13127 1097 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 ZNF268Q14587 947 aaPredicted RBP10.28□□□□□ -0.76
CCT3-213ENST00000489870 PUM1Q14671 1186 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCT3-213ENST00000489870 CFAP221Q4G0U5 840 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 ZC2HC1CQ53FD0 456 aaPredicted RBP10.28□□□□□ -0.76
CCT3-213ENST00000489870 GAREM2Q75VX8 874 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 SFR1Q86XK3 245 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 SYCP3Q8IZU3 236 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 TOP6BLQ8N6T0 577 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 IQUBQ8NA54 791 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 ATAD1Q8NBU5 361 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 LRRC15Q8TF66 581 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 TMEM174Q8WUU8 243 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 SNX21Q969T3 373 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 TRMT2BQ96GJ1 504 aaKnown RBP10.28□□□□□ -0.76
CCT3-213ENST00000489870 ZSWIM3Q96MP5 696 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 DNAJC25Q9H1X3 360 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 SLITRK6Q9H5Y7 841 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 PANK4Q9NVE7 773 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 KBTBD4Q9NVX7 518 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 TBC1D7Q9P0N9 293 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 TIMM13Q9Y5L4 95 aaPredicted RBP10.28□□□□□ -0.76
CCT3-213ENST00000489870 DENND4CQ5VZ89 1909 aa10.28□□□□□ -0.76
CCT3-213ENST00000489870 TCHHQ07283 1943 aa10.27□□□□□ -0.76
CCT3-213ENST00000489870 A0A1W2PRU2 124 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 ZNF233A6NK53 670 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 SHISA7A6NL88 538 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 GABRDO14764 452 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 ATG13O75143 517 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 NFICP08651 508 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 CHRNB1P11230 501 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 GABRR2P28476 465 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 MAGEA11P43364 429 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 CXCL12P48061 93 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 PPP3CCP48454 512 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 CSTF1Q05048 431 aaKnown RBP10.27□□□□□ -0.77
CCT3-213ENST00000489870 GRIN1Q05586 938 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 SPAG1Q07617 926 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 TEAD2Q15562 447 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 DUOXA2Q1HG44 320 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 USP49Q70CQ1 688 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 DYMQ7RTS9 669 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 LIMS2Q7Z4I7 341 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 HS6ST3Q8IZP7 471 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 LINC00301Q8NCQ3 95 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 BPIFB1Q8TDL5 484 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 BACH2Q9BYV9 841 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 ATXN3LQ9H3M9 355 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 LMAN1LQ9HAT1 526 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 MTMR6Q9Y217 621 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 MTF2Q9Y483 593 aaPredicted RBP10.27□□□□□ -0.77
CCT3-213ENST00000489870 PIAS3Q9Y6X2 628 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 PATJQ8NI35 1801 aa10.27□□□□□ -0.77
CCT3-213ENST00000489870 NUP210Q8TEM1 1887 aaPredicted RBP10.27□□□□□ -0.77
CCT3-213ENST00000489870 PVALEFA0A1B0GWK0 134 aa10.26□□□□□ -0.77
CCT3-213ENST00000489870 K7ELQ4 463 aaPredicted RBP10.26□□□□□ -0.77
CCT3-213ENST00000489870 RIOK3O14730 519 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms