RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 ANK1P16157 1881 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 CITO14578 2027 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 ESYT2A0FGR8 921 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 TTLL13PA6NNM8 815 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 ENO4A6NNW6 628 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 GOLGA8AA7E2F4 631 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 GOLGA8BA8MQT2 603 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 E9PAM4 449 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 K7EQS6 105 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 GAS7O60861 476 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 PSMD10O75832 226 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 RECQL4O94761 1208 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 CHRM1P11229 460 aaPredicted RBP8□□□□□ -1.13
COL9A1-209ENST00000489861 PSMA5P28066 241 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 GABRR2P28476 465 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 CIITAP33076 1130 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 CLDN6P56747 220 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 RHDQ02161 417 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 ZNF33AQ06730 810 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 CCDC173Q0VFZ6 552 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 PCBP1Q15365 356 aaKnown RBP eCLIP8□□□□□ -1.13
COL9A1-209ENST00000489861 PLEKHG6Q3KR16 790 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 TSGA10IPQ3SY00 556 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 GLRA4Q5JXX5 417 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 LRCH2Q5VUJ6 765 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 CPLX2Q6PUV4 134 aaKnown RBP8□□□□□ -1.13
COL9A1-209ENST00000489861 IFNLR1Q8IU57 520 aaPredicted RBP8□□□□□ -1.13
COL9A1-209ENST00000489861 SPACA3Q8IXA5 215 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 SNIP1Q8TAD8 396 aaKnown RBP8□□□□□ -1.13
COL9A1-209ENST00000489861 SLC7A3Q8WY07 619 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 TTC9Q92623 222 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 CD101Q93033 1021 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 SPACA7Q96KW9 195 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 TBC1D32Q96NH3 1257 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 PNMA5Q96PV4 448 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 RIT2Q99578 217 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 PI4K2AQ9BTU6 479 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 SLC46A2Q9BY10 475 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 TASP1Q9H6P5 420 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 BARHL2Q9NY43 387 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 WRAP73Q9P2S5 460 aaPredicted RBP8□□□□□ -1.13
COL9A1-209ENST00000489861 CNTNAP5Q8WYK1 1306 aa8□□□□□ -1.13
COL9A1-209ENST00000489861 ANAPC1Q9H1A4 1944 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 ARID1BQ8NFD5 2236 aaPredicted RBP7.99□□□□□ -1.13
COL9A1-209ENST00000489861 NID2Q14112 1375 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 TERTO14746 1132 aaKnown RBP7.99□□□□□ -1.13
COL9A1-209ENST00000489861 ASAP2O43150 1006 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 AP5Z1O43299 807 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 TRAPPC3O43617 180 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 DKC1O60832 514 aaKnown RBP eCLIP7.99□□□□□ -1.13
COL9A1-209ENST00000489861 AMPD2Q01433 879 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 RPL6Q02878 288 aaKnown RBP7.99□□□□□ -1.13
COL9A1-209ENST00000489861 SOX4Q06945 474 aaPredicted RBP7.99□□□□□ -1.13
COL9A1-209ENST00000489861 NCBP1Q09161 790 aaKnown RBP7.99□□□□□ -1.13
COL9A1-209ENST00000489861 GRIK2Q13002 908 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 EMC2Q15006 297 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 PTPRNQ16849 979 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 CTXN3Q4LDR2 81 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 PKDCCQ504Y2 493 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 C4orf17Q53FE4 359 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 CCDC157Q569K6 752 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 BLOC1S2Q6QNY1 142 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 DHRS13Q6UX07 377 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 DBX2Q6ZNG2 339 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 RABEPKQ7Z6M1 372 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 DNAJB7Q7Z6W7 309 aaPredicted RBP7.99□□□□□ -1.13
COL9A1-209ENST00000489861 SFTPA1Q8IWL2 248 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 TRIM22Q8IYM9 498 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 REXO1Q8N1G1 1221 aaKnown RBP7.99□□□□□ -1.13
COL9A1-209ENST00000489861 BEST2Q8NFU1 509 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 RDM1Q8NG50 284 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 WHAMMQ8TF30 809 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 HMGB4Q8WW32 186 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 USP13Q92995 863 aaPredicted RBP7.99□□□□□ -1.13
COL9A1-209ENST00000489861 NXPE2Q96DL1 559 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 MED8Q96G25 268 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 PPP1R10Q96QC0 940 aaKnown RBP7.99□□□□□ -1.13
COL9A1-209ENST00000489861 TEKT3Q9BXF9 490 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 ECT2Q9H8V3 914 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 IL21Q9HBE4 155 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 CPNE5Q9HCH3 593 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 XPNPEP1Q9NQW7 623 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 HSPBP1Q9NZL4 362 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 NAP1L2Q9ULW6 460 aaPredicted RBP7.99□□□□□ -1.13
COL9A1-209ENST00000489861 BTBD3Q9Y2F9 522 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 ZFHX3Q15911 3703 aa7.99□□□□□ -1.13
COL9A1-209ENST00000489861 KLF18A0A0U1RQI7 1052 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 A0A1W2PQD8 194 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 H7C4K7 107 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 SGK1O00141 431 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 ZBTB39O15060 712 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 SOAT2O75908 522 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 EPHB3P54753 998 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 PSMC5P62195 406 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 FUT2Q10981 343 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 SCRN1Q12765 414 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 KCNH2Q12809 1159 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 DUSP4Q13115 394 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 CAPSQ13938 189 aa7.98□□□□□ -1.13
COL9A1-209ENST00000489861 NUMA1Q14980 2115 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms