RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 DOCK6Q96HP0 2047 aa17.12■□□□□ 0.33
CTDSP1-209ENST00000488627 MICAL2O94851 1124 aa17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 SMC2O95347 1197 aa17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 VNN1O95497 513 aa17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 FAM163BP0C2L3 166 aa17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 ACAT1P24752 427 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 LMO2P25791 158 aa17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 LHX1P48742 406 aa17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 ADAM9Q13443 819 aa17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 EDRF1Q3B7T1 1238 aa17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 INTS6LQ5JSJ4 861 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 PARM1Q6UWI2 310 aa17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 DCP1BQ8IZD4 617 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 C2orf15Q8WU43 125 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 VRTNQ9H8Y1 702 aa17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 FRMD4BQ9Y2L6 1034 aa17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 R3HCC1Q9Y3T6 440 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 NME7Q9Y5B8 376 aa17.11■□□□□ 0.33
CTDSP1-209ENST00000488627 NOTCH4Q99466 2003 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 IKBKBO14920 756 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 KINO60870 393 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 HAPLN1P10915 354 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 CEBPBP17676 345 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 ATF6P18850 670 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 BMP6P22004 513 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 WARSP23381 471 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 RPL13P26373 211 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 ATICP31939 592 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 ALDH1A3P47895 512 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 TUFMP49411 452 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 PMS1P54277 932 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 PLD1Q13393 1074 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 CCDC142Q17RM4 750 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 ZACNQ401N2 412 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 IQCEQ6IPM2 695 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 FAM171BQ6P995 826 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 SV2AQ7L0J3 742 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 DNAJB7Q7Z6W7 309 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 TMC8Q8IU68 726 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 ADSSL1Q8N142 457 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 ELMOD1Q8N336 334 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 SPPL2BQ8TCT7 592 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 ING5Q8WYH8 240 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 FGF14Q92915 247 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 MRPL45Q9BRJ2 306 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 GDE1Q9NZC3 331 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 HOOK1Q9UJC3 728 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 MAN1B1Q9UKM7 699 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 DUSP12Q9UNI6 340 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 NUMBLQ9Y6R0 609 aa17.1■□□□□ 0.33
CTDSP1-209ENST00000488627 MYO10Q9HD67 2058 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 MYBPHLA2RUH7 354 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 ZNF197O14709 1029 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 NARSO43776 548 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 ATP2C2O75185 946 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 TACC1O75410 805 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 PCSK1P29120 753 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 PSMC2P35998 433 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 VAMP7P51809 220 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 EPHB3P54753 998 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 UBE2HP62256 183 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 MYL7Q01449 175 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 TSPY1Q01534 308 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 ENPEPQ07075 957 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 TRPC3Q13507 836 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 NCOA4Q13772 614 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 NFE2Q16621 373 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 WDR72Q3MJ13 1102 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 MGAT5BQ3V5L5 792 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 CYP4A22Q5TCH4 519 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 PDZD4Q76G19 769 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 ZC3H3Q8IXZ2 948 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 LEMD2Q8NC56 503 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 PSMG2Q969U7 264 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 ELMO3Q96BJ8 720 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 MCRS1Q96EZ8 462 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 EEF2KMTQ96G04 330 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 MMS19Q96T76 1030 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 ZNF334Q9HCZ1 680 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 GTF3C4Q9UKN8 822 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 ASB3Q9Y575 518 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 PCDHB5Q9Y5E4 795 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 DOCK8Q8NF50 2099 aa17.09■□□□□ 0.33
CTDSP1-209ENST00000488627 PHACTR2O75167 634 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 PDGFBP01127 241 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 CD44P16070 742 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 COL9A1P20849 921 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 PPP3CAQ08209 521 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 BIRC3Q13489 604 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 ANKRD40Q6AI12 368 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 ISM2Q6H9L7 571 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 CLEC17AQ6ZS10 378 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 INTS8Q75QN2 995 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 GAREM2Q75VX8 874 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 FAM186BQ8IYM0 893 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 SHKBP1Q8TBC3 707 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 SYAP1Q96A49 352 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 PBXIP1Q96AQ6 731 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 ZSWIM3Q96MP5 696 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 SEPT5Q99719 369 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms