RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 GTSE1Q9NYZ3 720 aa13.29□□□□□ -0.28
TTC3-221ENST00000488522 CPSF3Q9UKF6 684 aaKnown RBP13.29□□□□□ -0.28
TTC3-221ENST00000488522 TBX20Q9UMR3 447 aa13.29□□□□□ -0.28
TTC3-221ENST00000488522 EML5Q05BV3 1969 aa13.29□□□□□ -0.28
TTC3-221ENST00000488522 DPYSL4O14531 572 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 TM4SF5O14894 197 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 HNRNPDLO14979 420 aaKnown RBP13.28□□□□□ -0.28
TTC3-221ENST00000488522 GDF9O60383 454 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 AKAP3O75969 853 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 EPN2O95208 641 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 ABCD1P33897 745 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 RAP1GAPP47736 663 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 LIG4P49917 911 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 GUCY2FP51841 1108 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 RAD51AP2Q09MP3 1159 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 ITPRIPL2Q3MIP1 535 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 TMEM196Q5HYL7 178 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 GPR158Q5T848 1215 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 ARMCX5Q6P1M9 558 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 SLC39A4Q6P5W5 647 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 ZFYVE19Q96K21 471 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 FIZ1Q96SL8 496 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 FAM83CQ9BQN1 747 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 ASB7Q9H672 318 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 RPF1Q9H9Y2 349 aaKnown RBP13.28□□□□□ -0.28
TTC3-221ENST00000488522 DSEQ9UL01 958 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 SLC27A5Q9Y2P5 690 aa13.28□□□□□ -0.28
TTC3-221ENST00000488522 SDK1Q7Z5N4 2213 aa13.27□□□□□ -0.28
TTC3-221ENST00000488522 TRDMT1O14717 391 aaKnown RBP13.27□□□□□ -0.29
TTC3-221ENST00000488522 ZNF806P0C7X5 589 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 VEPH1Q14D04 833 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 PON2Q15165 354 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 PTPAQ15257 358 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 ST3GAL2Q16842 350 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 PLA2G2CQ5R387 149 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 JADE1Q6IE81 842 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 TMEM150AQ86TG1 271 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 FAM200AQ8TCP9 573 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 SPPL2BQ8TCT7 592 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 GAB3Q8WWW8 586 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 CHFRQ96EP1 664 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 BICD1Q96G01 975 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 AK8Q96MA6 479 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 REEP2Q9BRK0 252 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 MTMR6Q9Y217 621 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 C2CD2Q9Y426 696 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 PCDHGA5Q9Y5G8 931 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 STYXL1Q9Y6J8 313 aa13.27□□□□□ -0.29
TTC3-221ENST00000488522 LAMA1P25391 3075 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 NPHP3-ACAD11A0A0J9YXS1 232 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 SOAT2O75908 522 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 NFICP08651 508 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 DDX6P26196 483 aaKnown RBP eCLIP13.26□□□□□ -0.29
TTC3-221ENST00000488522 PMLP29590 882 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 MATR3P43243 847 aaKnown RBP eCLIP13.26□□□□□ -0.29
TTC3-221ENST00000488522 SHC2P98077 582 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 CYP4F8P98187 520 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 GTF2BQ00403 316 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 TNK2Q07912 1038 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 FAM208BQ5VWN6 2430 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 PKN3Q6P5Z2 889 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 KIAA1549LQ6ZVL6 1849 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 BRAPQ7Z569 592 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 CMTM8Q8IZV2 173 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 LRRC15Q8TF66 581 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 ZC3H10Q96K80 434 aaKnown RBP13.26□□□□□ -0.29
TTC3-221ENST00000488522 GCNAQ96QF7 691 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 LPIN3Q9BQK8 851 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 SLC46A2Q9BY10 475 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 ST6GALNAC4Q9H4F1 302 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 KIF9Q9HAQ2 790 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 PARVGQ9HBI0 331 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 HPS4Q9NQG7 708 aa13.26□□□□□ -0.29
TTC3-221ENST00000488522 THG1LQ9NWX6 298 aaKnown RBP13.26□□□□□ -0.29
TTC3-221ENST00000488522 TCHHQ07283 1943 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 K7ENM7 598 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 EXTL3O43909 919 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 F11P03951 625 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 ZSCAN22P10073 491 aaPredicted RBP13.25□□□□□ -0.29
TTC3-221ENST00000488522 HAPLN1P10915 354 aaPredicted RBP13.25□□□□□ -0.29
TTC3-221ENST00000488522 HMGA1P17096 107 aaKnown RBP13.25□□□□□ -0.29
TTC3-221ENST00000488522 HOXC13P31276 330 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 ZNF268Q14587 947 aaPredicted RBP13.25□□□□□ -0.29
TTC3-221ENST00000488522 TMEM132DQ14C87 1099 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 SLC39A12Q504Y0 691 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 HEATR6Q6AI08 1181 aaKnown RBP13.25□□□□□ -0.29
TTC3-221ENST00000488522 FSTL4Q6MZW2 842 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 CEP68Q76N32 757 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 CACNA2D4Q7Z3S7 1137 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 CAMKK1Q8N5S9 505 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 LEO1Q8WVC0 666 aaPredicted RBP13.25□□□□□ -0.29
TTC3-221ENST00000488522 IPO9Q96P70 1041 aaKnown RBP13.25□□□□□ -0.29
TTC3-221ENST00000488522 SEPT5Q99719 369 aaPredicted RBP13.25□□□□□ -0.29
TTC3-221ENST00000488522 MSTO1Q9BUK6 570 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 BLOC1S4Q9NUP1 217 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 FRYQ5TBA9 3013 aa13.25□□□□□ -0.29
TTC3-221ENST00000488522 VWA3AA6NCI4 1184 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 TRAK2O60296 914 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 ATG13O75143 517 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 RPP40O75818 363 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms