RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ZBED2Q9BTP6 218 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 CARD6Q9BX69 1037 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 THAP2Q9H0W7 228 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 MTUS1Q9ULD2 1270 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 SNX12Q9UMY4 172 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 TTC28Q96AY4 2481 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 MYO7AQ13402 2215 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 UPP2O95045 317 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 CYP1A1P04798 512 aaPredicted RBP13.54□□□□□ -0.24
NELFE-209ENST00000488426 UNGP13051 313 aaPredicted RBP13.54□□□□□ -0.24
NELFE-209ENST00000488426 TCP1P17987 556 aaKnown RBP13.54□□□□□ -0.24
NELFE-209ENST00000488426 CD58P19256 250 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 FBXO47Q5MNV8 452 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 SCARA5Q6ZMJ2 495 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 RTN4RL1Q86UN2 441 aaPredicted RBP13.54□□□□□ -0.24
NELFE-209ENST00000488426 LRRC57Q8N9N7 239 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 SLC35G2Q8TBE7 412 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 TRIM11Q96F44 468 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 GAS2L1Q99501 681 aaPredicted RBP13.54□□□□□ -0.24
NELFE-209ENST00000488426 APOL6Q9BWW8 343 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 ERVK-5Q9HDB9 667 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 PARP2Q9UGN5 583 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 GTF3C4Q9UKN8 822 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 POLIQ9UNA4 740 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 HYOU1Q9Y4L1 999 aa13.54□□□□□ -0.24
NELFE-209ENST00000488426 THAP12O43422 761 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 LPXNO60711 386 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 PAEPP09466 180 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 WEE2P0C1S8 567 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 CYP3A5P20815 502 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 AKAP5P24588 427 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 GUCY2FP51841 1108 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 TNNC1P63316 161 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 CENPCQ03188 943 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 NFX1Q12986 1120 aaKnown RBP13.53□□□□□ -0.24
NELFE-209ENST00000488426 SLFN11Q7Z7L1 901 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 SEPT8Q92599 483 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 ARHGEF26Q96DR7 871 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 RAD9AQ99638 391 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 TRAIPQ9BWF2 469 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 FAM105AQ9NUU6 356 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.53□□□□□ -0.24
NELFE-209ENST00000488426 SMIM28A0A1B0GU29 152 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 LINC01553A4QN01 128 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 EFCAB8A8MWE9 144 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 TADA3O75528 432 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 MTA2O94776 668 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 LSM8O95777 96 aaKnown RBP13.53□□□□□ -0.24
NELFE-209ENST00000488426 CYP1A2P05177 515 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 MYBL1P10243 752 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 CD52P31358 61 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 RAB27AP51159 221 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 PAK2Q13177 524 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 MEI1Q5TIA1 1274 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 ZNF606Q8WXB4 792 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 LINC01599Q8WXQ3 324 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 TOP1MTQ969P6 601 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 TLR10Q9BXR5 811 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 TUBGCP4Q9UGJ1 667 aa13.53□□□□□ -0.24
NELFE-209ENST00000488426 DLL1O00548 723 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 ENPP3O14638 875 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 CALCAP01258 141 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 ZSCAN20P17040 1043 aaPredicted RBP13.52□□□□□ -0.25
NELFE-209ENST00000488426 ATF7P17544 494 aaPredicted RBP13.52□□□□□ -0.25
NELFE-209ENST00000488426 NSFP46459 744 aaKnown RBP13.52□□□□□ -0.25
NELFE-209ENST00000488426 TUBB4BP68371 445 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 NOMO3P69849 1222 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 CKAP4Q07065 602 aaKnown RBP13.52□□□□□ -0.25
NELFE-209ENST00000488426 INCA1Q0VD86 236 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 C9orf57Q5W0N0 161 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 MICALL1Q8N3F8 863 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 ZNF653Q96CK0 615 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 VCPIP1Q96JH7 1222 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 SDCBP2Q9H190 292 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 CXCL16Q9H2A7 254 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 RNF39Q9H2S5 420 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 SMYD3Q9H7B4 428 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 AVENQ9NQS1 362 aaPredicted RBP13.52□□□□□ -0.25
NELFE-209ENST00000488426 UVRAGQ9P2Y5 699 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 PADI3Q9ULW8 664 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 PCDHGC3Q9UN70 934 aa13.52□□□□□ -0.25
NELFE-209ENST00000488426 BRWD1Q9NSI6 2320 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 MED7O43513 233 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 CILPO75339 1184 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 FTCDO95954 541 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 ITGA4P13612 1032 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 PNPLA4P41247 253 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 HTRA4P83105 476 aaPredicted RBP13.51□□□□□ -0.25
NELFE-209ENST00000488426 GLRA4Q5JXX5 417 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 NAA35Q5VZE5 725 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 C18orf25Q96B23 403 aaPredicted RBP13.51□□□□□ -0.25
NELFE-209ENST00000488426 ZNF560Q96MR9 790 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 OSBPL9Q96SU4 736 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 C17orf80Q9BSJ5 609 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 ZNF518BQ9C0D4 1074 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 OSGEPQ9NPF4 335 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 KLK14Q9P0G3 267 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 CTTNBP2NLQ9P2B4 639 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 PUF60Q9UHX1 559 aaKnown RBP13.51□□□□□ -0.25
NELFE-209ENST00000488426 MTCH2Q9Y6C9 303 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms