RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 SLC18A3Q16572 532 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 SFMBT2Q5VUG0 894 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 TBC1D1Q86TI0 1168 aaPredicted RBP14.56□□□□□ -0.08
COPS7B-221ENST00000488111 ATXN2LQ8WWM7 1075 aaKnown RBP14.56□□□□□ -0.08
COPS7B-221ENST00000488111 ZNF333Q96JL9 665 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 LRRC4CQ9HCJ2 640 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 RBAKQ9NYW8 714 aaPredicted RBP14.56□□□□□ -0.08
COPS7B-221ENST00000488111 OGTO15294 1046 aa14.55□□□□□ -0.08
COPS7B-221ENST00000488111 LRRN2O75325 713 aa14.55□□□□□ -0.08
COPS7B-221ENST00000488111 LDHAP00338 332 aaKnown RBP14.55□□□□□ -0.08
COPS7B-221ENST00000488111 ACTN1P12814 892 aa14.55□□□□□ -0.08
COPS7B-221ENST00000488111 AP1ARQ63HQ0 302 aa14.55□□□□□ -0.08
COPS7B-221ENST00000488111 TRPM8Q7Z2W7 1104 aa14.55□□□□□ -0.08
COPS7B-221ENST00000488111 LSM14BQ9BX40 385 aaKnown RBP14.55□□□□□ -0.08
COPS7B-221ENST00000488111 TXLNGYQ9BZA5 131 aa14.55□□□□□ -0.08
COPS7B-221ENST00000488111 SENP6Q9GZR1 1112 aaPredicted RBP14.55□□□□□ -0.08
COPS7B-221ENST00000488111 KIAA1586Q9HCI6 787 aa14.55□□□□□ -0.08
COPS7B-221ENST00000488111 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.55□□□□□ -0.08
COPS7B-221ENST00000488111 NOC2LQ9Y3T9 749 aaKnown RBP14.55□□□□□ -0.08
COPS7B-221ENST00000488111 TRPV2Q9Y5S1 764 aa14.55□□□□□ -0.08
COPS7B-221ENST00000488111 CCDC188H7C350 402 aa14.55□□□□□ -0.08
COPS7B-221ENST00000488111 ARVCFO00192 962 aa14.55□□□□□ -0.08
COPS7B-221ENST00000488111 KIAA0391O15091 583 aaKnown RBP14.55□□□□□ -0.08
COPS7B-221ENST00000488111 NQO1P15559 274 aaKnown RBP14.55□□□□□ -0.08
COPS7B-221ENST00000488111 ATN1P54259 1190 aaPredicted RBP14.55□□□□□ -0.08
COPS7B-221ENST00000488111 MICAL1Q8TDZ2 1067 aa14.55□□□□□ -0.08
COPS7B-221ENST00000488111 U2AF1L4Q8WU68 220 aaKnown RBP14.55□□□□□ -0.08
COPS7B-221ENST00000488111 CCDC134Q9H6E4 229 aa14.55□□□□□ -0.08
COPS7B-221ENST00000488111 AGAP1Q9UPQ3 857 aa14.55□□□□□ -0.08
COPS7B-221ENST00000488111 DAPK3O43293 454 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 PPFIA2O75334 1257 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 NOL4O94818 638 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 MMEP08473 750 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 CHN1P15882 459 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 CCND1P24385 295 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 NFX1Q12986 1120 aaKnown RBP14.54□□□□□ -0.08
COPS7B-221ENST00000488111 EXOC3L4Q17RC7 722 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 SLC43A3Q8NBI5 491 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 FNBP1Q96RU3 617 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 TMEM117Q9H0C3 514 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 SLITRK6Q9H5Y7 841 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 PIN4Q9Y237 131 aaKnown RBP14.54□□□□□ -0.08
COPS7B-221ENST00000488111 PGRMC1O00264 195 aaKnown RBP14.54□□□□□ -0.08
COPS7B-221ENST00000488111 SGPL1O95470 568 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 TNNI1P19237 187 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 MMP13P45452 471 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 MYL7Q01449 175 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 PTPN11Q06124 597 aaPredicted RBP14.54□□□□□ -0.08
COPS7B-221ENST00000488111 DHX9Q08211 1270 aaKnown RBP14.54□□□□□ -0.08
COPS7B-221ENST00000488111 PTK7Q13308 1070 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 BLMHQ13867 455 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 HOOK3Q86VS8 718 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 ZNF516Q92618 1163 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.54□□□□□ -0.085e-7■■□□□ 11.8
COPS7B-221ENST00000488111 PACSIN1Q9BY11 444 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 EIF2AQ9BY44 585 aaKnown RBP14.54□□□□□ -0.08
COPS7B-221ENST00000488111 ETAA1Q9NY74 926 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 GCNT4Q9P109 453 aa14.54□□□□□ -0.08
COPS7B-221ENST00000488111 CPSF3Q9UKF6 684 aaKnown RBP14.54□□□□□ -0.08
COPS7B-221ENST00000488111 FRMPD3Q5JV73 1810 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 A0A087X0T9 212 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 CEP104O60308 925 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 DIAPH2O60879 1101 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 CAND2O75155 1236 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 NPTXRO95502 500 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 FAM228BP0C875 321 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 PON1P27169 355 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 NCALDP61601 193 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 MGAT3Q09327 533 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 PSMD6Q15008 389 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 IFI16Q16666 785 aaKnown RBP14.53□□□□□ -0.08
COPS7B-221ENST00000488111 ZNF618Q5T7W0 954 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 LRRC34Q8IZ02 419 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 TMC2Q8TDI7 906 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 ELMO3Q96BJ8 720 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 DDX47Q9H0S4 455 aaKnown RBP14.53□□□□□ -0.08
COPS7B-221ENST00000488111 ADAM7Q9H2U9 754 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 NLRC4Q9NPP4 1024 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 FAM114A2Q9NRY5 505 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 HES2Q9Y543 173 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 PTPRJQ12913 1337 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 A6NHS1 94 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 STAG3L1P0CL83 205 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 CXCL8P10145 99 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 RARAP10276 462 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 MCF2P10911 925 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 MNX1P50219 401 aaPredicted RBP14.53□□□□□ -0.08
COPS7B-221ENST00000488111 CCNG1P51959 295 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 ENOX2Q16206 610 aaKnown RBP14.53□□□□□ -0.08
COPS7B-221ENST00000488111 TRIM71Q2Q1W2 868 aaKnown RBP14.53□□□□□ -0.08
COPS7B-221ENST00000488111 RASGEF1CQ8N431 466 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 LRRC57Q8N9N7 239 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 CCDC26Q8TAB7 109 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 DIS3LQ8TF46 1054 aaKnown RBP14.53□□□□□ -0.08
COPS7B-221ENST00000488111 ADPGKQ9BRR6 497 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 AP1M1Q9BXS5 423 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 AGO3Q9H9G7 860 aaKnown RBP14.53□□□□□ -0.08
COPS7B-221ENST00000488111 SAMD15Q9P1V8 674 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 ST3GAL5Q9UNP4 418 aa14.53□□□□□ -0.08
COPS7B-221ENST00000488111 NUDT17P0C025 328 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms