RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SNX19Q92543 992 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 LENG9Q96B70 501 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 NACC2Q96BF6 587 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 BOD1Q96IK1 185 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 LRIG1Q96JA1 1093 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 SLC46A1Q96NT5 459 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 MOGAT1Q96PD6 335 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 ADAM2Q99965 735 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 ZNF747Q9BV97 191 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 TMPRSS5Q9H3S3 457 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 MMRN2Q9H8L6 949 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 ETAA1Q9NY74 926 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 XPR1Q9UBH6 696 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 HESX1Q9UBX0 185 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 TESQ9UGI8 421 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 AFF4Q9UHB7 1163 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 CORO2BQ9UQ03 480 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 RAD54BQ9Y620 910 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 A0A1W2PS29 197 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 E7ENX8 843 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 F5H697 171 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 MATN3O15232 486 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 ZNF202O95125 648 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 ZFPL1O95159 310 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 SPDEFO95238 335 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 RPL17P18621 184 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 NPTX2P47972 431 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 GCLCP48506 637 aaPredicted RBP4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 VAV2P52735 878 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 KRTAP10-2P60368 255 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 TAP2Q03519 686 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 TP53BP2Q13625 1128 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 DYRK1AQ13627 763 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 IQCB1Q15051 598 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 PTPAQ15257 358 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 LONRF3Q496Y0 759 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 C3orf38Q5JPI3 329 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 IL31Q6EBC2 164 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 MRGPREQ86SM8 312 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 ADGRG5Q8IZF4 528 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 Q8NA96 180 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 POC1BQ8TC44 478 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 HEPHQ9BQS7 1158 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 MLST8Q9BVC4 326 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 SPATA5L1Q9BVQ7 753 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 BTBD1Q9H0C5 482 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 SMOC2Q9H3U7 446 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 UNKLQ9H9P5 680 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 TBCCD1Q9NVR7 557 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 STK32BQ9NY57 414 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 PAXBP1Q9Y5B6 917 aa4.74□□□□□ -1.65
ECHDC1-217ENST00000488087 ANO9A1A5B4 782 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 SOAT2O75908 522 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 ADH4P08319 380 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 ATXN1LP0C7T5 689 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 ITGAMP11215 1152 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 FDXRP22570 491 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 PXNP49023 591 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 NDUFV1P49821 464 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 NEK3P51956 506 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 RPS16P62249 146 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 TCF15Q12870 199 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 IFIT5Q13325 482 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 FNDC7Q5VTL7 733 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 MICALCLQ6ZW33 695 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 C11orf96Q7Z7L8 435 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 SESTD1Q86VW0 696 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 ARHGEF19Q8IW93 802 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 KRT78Q8N1N4 520 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 LCORLQ8N3X6 602 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 PARD3BQ8TEW8 1205 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 RAPGEF4Q8WZA2 1011 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 PHKBQ93100 1093 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 PTCD3Q96EY7 689 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 DPH1Q9BZG8 443 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 ZNF518BQ9C0D4 1074 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 MS4A7Q9GZW8 240 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 PNPLA8Q9NP80 782 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 TMEM74BQ9NUR3 256 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 INTS13Q9NVM9 706 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 ZSCAN32Q9NX65 697 aa4.73□□□□□ -1.65
ECHDC1-217ENST00000488087 A0A087WWL8 130 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 A0A0B4J269 797 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 TRIM43BA6NCK2 446 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 TMEM233B4DJY2 109 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 KPNA5O15131 536 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 TRIAP1O43715 76 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 RASSF9O75901 435 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 XRCC6P12956 609 aaKnown RBP eCLIP4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 SLC5A1P13866 664 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 TNFRSF1AP19438 455 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 GATA3P23771 443 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 MCM7P33993 719 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 VIPR2P41587 438 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 TOB1P50616 345 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 LILRA4P59901 499 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 KRT17Q04695 432 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 TUBB3Q13509 450 aa4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 BOP1Q14137 746 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-217ENST00000488087 HLXQ14774 488 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms