RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 CORO1BQ9BR76 489 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 GTPBP4Q9BZE4 634 aaKnown RBP18.28■□□□□ 0.52
HMG20B-212ENST00000487894 SMOC2Q9H3U7 446 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 CDH7Q9ULB5 785 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 ZNF638Q14966 1978 aaKnown RBP18.28■□□□□ 0.52
HMG20B-212ENST00000487894 TRIM49BA6NDI0 452 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 NRG2O14511 850 aaPredicted RBP18.27■□□□□ 0.52
HMG20B-212ENST00000487894 PHACTR2O75167 634 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 TRIM49P0CI25 452 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 TRIM49CP0CI26 452 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 CD44P16070 742 aaKnown RBP18.27■□□□□ 0.52
HMG20B-212ENST00000487894 BMP6P22004 513 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 ATICP31939 592 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 PSMC2P35998 433 aaKnown RBP18.27■□□□□ 0.52
HMG20B-212ENST00000487894 LHX1P48742 406 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 VAMP7P51809 220 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 PMS1P54277 932 aaKnown RBP18.27■□□□□ 0.52
HMG20B-212ENST00000487894 TSPY1Q01534 308 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 SMARCB1Q12824 385 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 PLD1Q13393 1074 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 MTMR3Q13615 1198 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 NCOA4Q13772 614 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 CCDC142Q17RM4 750 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 ZACNQ401N2 412 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 TMEM31Q5JXX7 168 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 CLEC17AQ6ZS10 378 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 INTS8Q75QN2 995 aaKnown RBP18.27■□□□□ 0.52
HMG20B-212ENST00000487894 NPAS3Q8IXF0 933 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 ZC3H3Q8IXZ2 948 aaKnown RBP18.27■□□□□ 0.52
HMG20B-212ENST00000487894 HS6ST3Q8IZP7 471 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 ELMOD1Q8N336 334 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 SPPL2BQ8TCT7 592 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 C2orf15Q8WU43 125 aaKnown RBP18.27■□□□□ 0.52
HMG20B-212ENST00000487894 ING5Q8WYH8 240 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 FGF13Q92913 245 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 SYAP1Q96A49 352 aaPredicted RBP18.27■□□□□ 0.52
HMG20B-212ENST00000487894 VRTNQ9H8Y1 702 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 KCNK12Q9HB15 430 aa18.27■□□□□ 0.52
HMG20B-212ENST00000487894 ZFP37Q9Y6Q3 630 aaPredicted RBP18.27■□□□□ 0.52
HMG20B-212ENST00000487894 ANAPC1Q9H1A4 1944 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 IKBKBO14920 756 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 CEBPBP17676 345 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 ATF6P18850 670 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 WARSP23381 471 aaKnown RBP18.26■□□□□ 0.51
HMG20B-212ENST00000487894 CCR2P41597 374 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 EPHA5P54756 1037 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 TNNC1P63316 161 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 ENPEPQ07075 957 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 HTR4Q13639 388 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 MORC3Q14149 939 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 ZNF699Q32M78 642 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 WDR72Q3MJ13 1102 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 ANKRD40Q6AI12 368 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 SV2AQ7L0J3 742 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 TCEAL4Q96EI5 215 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 EEF2KMTQ96G04 330 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 ZNF512Q96ME7 567 aaPredicted RBP18.26■□□□□ 0.51
HMG20B-212ENST00000487894 MMS19Q96T76 1030 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 SEPT5Q99719 369 aaPredicted RBP18.26■□□□□ 0.51
HMG20B-212ENST00000487894 TSG101Q99816 390 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 LRFN3Q9BTN0 628 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 MKNK1Q9BUB5 465 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 ABI2Q9NYB9 513 aaPredicted RBP18.26■□□□□ 0.51
HMG20B-212ENST00000487894 IGSF9Q9P2J2 1179 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 MRPS23Q9Y3D9 190 aaKnown RBP18.26■□□□□ 0.51
HMG20B-212ENST00000487894 NME7Q9Y5B8 376 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 MYH10P35580 1976 aa18.26■□□□□ 0.51
HMG20B-212ENST00000487894 ANHXE9PGG2 379 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 CETN3O15182 167 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 TACC1O75410 805 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 KRT13P13646 458 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 CCNE1P24864 410 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 LMO2P25791 158 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 PCSK1P29120 753 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 ALDH1A3P47895 512 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 EPHB3P54753 998 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 MCCD1P59942 119 aaPredicted RBP18.25■□□□□ 0.51
HMG20B-212ENST00000487894 LRRC63Q05C16 580 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 PPP3CAQ08209 521 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 SIGLEC14Q08ET2 396 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 NFE2Q16621 373 aaPredicted RBP18.25■□□□□ 0.51
HMG20B-212ENST00000487894 MGAT5BQ3V5L5 792 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 IQCEQ6IPM2 695 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 POTEHQ6S545 545 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 TRIM67Q6ZTA4 783 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 PDZD4Q76G19 769 aaPredicted RBP18.25■□□□□ 0.51
HMG20B-212ENST00000487894 TMC8Q8IU68 726 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 RSAD2Q8WXG1 361 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 ELMO3Q96BJ8 720 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 SYT15Q9BQS2 421 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 MRPL45Q9BRJ2 306 aaKnown RBP18.25■□□□□ 0.51
HMG20B-212ENST00000487894 LRRC3Q9BY71 257 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 ASAH2Q9NR71 780 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 PCDHB5Q9Y5E4 795 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 PATJQ8NI35 1801 aa18.25■□□□□ 0.51
HMG20B-212ENST00000487894 ZNF318Q5VUA4 2279 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 COL4A2P08572 1712 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 PRR33A8MZF0 331 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 BIN1O00499 593 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 PSMA7O14818 248 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms