RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 HSPBP1Q9NZL4 362 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 MMP17Q9ULZ9 603 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 SLC12A7Q9Y666 1083 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 U3KPZ7 1027 aaPredicted RBP6.43□□□□□ -1.38
COL4A3-206ENST00000487633 SCN1AP35498 2009 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 AHCTF1Q8WYP5 2266 aa6.43□□□□□ -1.38
COL4A3-206ENST00000487633 IGHV1OR15-9A0A0B4J2B8 117 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 TEX51A0A1B0GUA7 166 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 MTMR11A4FU01 709 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 KCNK3O14649 394 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 CAPN9O14815 690 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 PPEF2O14830 753 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 TADA3O75528 432 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 LARGE1O95461 756 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 KLF8O95600 359 aaPredicted RBP6.42□□□□□ -1.38
COL4A3-206ENST00000487633 GABRG2P18507 467 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 LIFRP42702 1097 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 QARSP47897 775 aaKnown RBP6.42□□□□□ -1.38
COL4A3-206ENST00000487633 OSTNP61366 133 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 PLCB2Q00722 1185 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 RPL6Q02878 288 aaKnown RBP6.42□□□□□ -1.38
COL4A3-206ENST00000487633 CCDC173Q0VFZ6 552 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 SMAD1Q15797 465 aaKnown RBP6.42□□□□□ -1.38
COL4A3-206ENST00000487633 PTPRNQ16849 979 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 PFKFB3Q16875 520 aaPredicted RBP6.42□□□□□ -1.38
COL4A3-206ENST00000487633 EML3Q32P44 896 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 Q4G0T1 1027 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 TAF1BQ53T94 588 aaPredicted RBP6.42□□□□□ -1.38
COL4A3-206ENST00000487633 NT5DC1Q5TFE4 455 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 CENPPQ6IPU0 288 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 CASC1Q6TDU7 716 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 ALKAL1Q6UXT8 129 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 MIB1Q86YT6 1006 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 SPACA3Q8IXA5 215 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 CMTM8Q8IZV2 173 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 TBCKQ8TEA7 893 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 LRRC15Q8TF66 581 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 SETD7Q8WTS6 366 aaKnown RBP6.42□□□□□ -1.38
COL4A3-206ENST00000487633 PSMG2Q969U7 264 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 ACDQ96AP0 544 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 NAF1Q96HR8 494 aaKnown RBP6.42□□□□□ -1.38
COL4A3-206ENST00000487633 HSPA12BQ96MM6 686 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 TBC1D32Q96NH3 1257 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 PNMA5Q96PV4 448 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 CYP2S1Q96SQ9 504 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 LXNQ9BS40 222 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 KIFC3Q9BVG8 833 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 POLR3FQ9H1D9 316 aaPredicted RBP6.42□□□□□ -1.38
COL4A3-206ENST00000487633 CHMP4BQ9H444 224 aaKnown RBP6.42□□□□□ -1.38
COL4A3-206ENST00000487633 GMIPQ9P107 970 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 ANKMY1Q9P2S6 941 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 IL17BQ9UHF5 180 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 RCAN3Q9UKA8 241 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.42□□□□□ -1.38
COL4A3-206ENST00000487633 APOBEC2Q9Y235 224 aaKnown RBP6.42□□□□□ -1.38
COL4A3-206ENST00000487633 RBM8AQ9Y5S9 174 aaKnown RBP6.42□□□□□ -1.38
COL4A3-206ENST00000487633 STK24Q9Y6E0 443 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 ABCA12Q86UK0 2595 aa6.42□□□□□ -1.38
COL4A3-206ENST00000487633 TCHHQ07283 1943 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 TCRBV21S2A2A0A5A6 115 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 ESYT2A0FGR8 921 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 CCER2I3L3R5 266 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 ERVH48-1M5A8F1 160 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 SYN3O14994 580 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 ASAP2O43150 1006 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 F11P03951 625 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 C6P13671 934 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 LIG1P18858 919 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 POU3F2P20265 443 aaPredicted RBP6.41□□□□□ -1.38
COL4A3-206ENST00000487633 WEE1P30291 646 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 RFC5P40937 340 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 WASP42768 502 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 KIR2DL1P43626 348 aaPredicted RBP6.41□□□□□ -1.38
COL4A3-206ENST00000487633 CSRP3P50461 194 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 GUCY2FP51841 1108 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 SPAG1Q07617 926 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 SLC14A1Q13336 389 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 HNRNPDQ14103 355 aaKnown RBP6.41□□□□□ -1.38
COL4A3-206ENST00000487633 NPY5RQ15761 445 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 PLEKHG6Q3KR16 790 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 FBXO43Q4G163 708 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 SEZ6Q53EL9 994 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 XKR4Q5GH76 650 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 ARHGAP40Q5TG30 622 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 SDHAF4Q5VUM1 108 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 PPP4R3CPQ6ZMV5 832 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 DBX2Q6ZNG2 339 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 PDCD7Q8N8D1 485 aaKnown RBP6.41□□□□□ -1.38
COL4A3-206ENST00000487633 TRIML1Q8N9V2 468 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 LEMD2Q8NC56 503 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 RDM1Q8NG50 284 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 TCP11Q8WWU5 503 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 TSC1Q92574 1164 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 HAS1Q92839 578 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 SUSD3Q96L08 255 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 JPH2Q9BR39 696 aaPredicted RBP6.41□□□□□ -1.38
COL4A3-206ENST00000487633 CCDC113Q9H0I3 377 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 OSBPL3Q9H4L5 887 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 CD248Q9HCU0 757 aa6.41□□□□□ -1.38
COL4A3-206ENST00000487633 VPS54Q9P1Q0 977 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms