RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 GAREM2Q75VX8 874 aa13.4□□□□□ -0.26
SREBF1-215ENST00000487401 MAML2Q8IZL2 1156 aaPredicted RBP13.4□□□□□ -0.26
SREBF1-215ENST00000487401 GPD1LQ8N335 351 aa13.4□□□□□ -0.26
SREBF1-215ENST00000487401 PDCL2Q8N4E4 241 aa13.4□□□□□ -0.26
SREBF1-215ENST00000487401 LRRC52Q8N7C0 313 aa13.4□□□□□ -0.26
SREBF1-215ENST00000487401 ATRIPQ8WXE1 791 aa13.4□□□□□ -0.26
SREBF1-215ENST00000487401 HPS3Q969F9 1004 aa13.4□□□□□ -0.26
SREBF1-215ENST00000487401 ANKRD36BP1Q96IX9 119 aa13.4□□□□□ -0.26
SREBF1-215ENST00000487401 TRIM9Q9C026 710 aa13.4□□□□□ -0.26
SREBF1-215ENST00000487401 TASP1Q9H6P5 420 aa13.4□□□□□ -0.26
SREBF1-215ENST00000487401 PDE11AQ9HCR9 933 aa13.4□□□□□ -0.26
SREBF1-215ENST00000487401 KBTBD4Q9NVX7 518 aa13.4□□□□□ -0.26
SREBF1-215ENST00000487401 DMDP11532 3685 aa13.4□□□□□ -0.26
SREBF1-215ENST00000487401 MYO15AQ9UKN7 3530 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 CHADO15335 359 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 KINO60870 393 aaKnown RBP13.39□□□□□ -0.27
SREBF1-215ENST00000487401 PRPF40AO75400 957 aaKnown RBP13.39□□□□□ -0.27
SREBF1-215ENST00000487401 TNNC2P02585 160 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 ZSCAN22P10073 491 aaPredicted RBP13.39□□□□□ -0.27
SREBF1-215ENST00000487401 MYO1EQ12965 1108 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 SURF1Q15526 300 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 E2F4Q16254 413 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 TMEM86AQ8N2M4 240 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 RSPRY1Q96DX4 576 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 HINFPQ9BQA5 517 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 ACBD6Q9BR61 282 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 C8orf33Q9H7E9 229 aaPredicted RBP13.39□□□□□ -0.27
SREBF1-215ENST00000487401 LMAN1LQ9HAT1 526 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 KIAA1586Q9HCI6 787 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 THG1LQ9NWX6 298 aaKnown RBP13.39□□□□□ -0.27
SREBF1-215ENST00000487401 DDX43Q9NXZ2 648 aaKnown RBP13.39□□□□□ -0.27
SREBF1-215ENST00000487401 FAM13BQ9NYF5 915 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 L1RE1Q9UN81 338 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 SNX9Q9Y5X1 595 aa13.39□□□□□ -0.27
SREBF1-215ENST00000487401 EIF3DO15371 548 aaKnown RBP eCLIP13.38□□□□□ -0.27
SREBF1-215ENST00000487401 POLR2DO15514 142 aaKnown RBP13.38□□□□□ -0.27
SREBF1-215ENST00000487401 ATF6P18850 670 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 CCNE1P24864 410 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 ME1P48163 572 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 LHX1P48742 406 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 MLLT6P55198 1093 aaPredicted RBP13.38□□□□□ -0.27
SREBF1-215ENST00000487401 CYP4F8P98187 520 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 FCHO2Q0JRZ9 810 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 FZD5Q13467 585 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 DUOXA2Q1HG44 320 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 ARHGAP29Q52LW3 1261 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 C1orf228Q6PIY5 440 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 SHC4Q6S5L8 630 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 GLIS3Q8NEA6 775 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 MSANTD3Q96H12 275 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 C7orf25Q9BPX7 421 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 PI4K2AQ9BTU6 479 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 MTMR12Q9C0I1 747 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 MAGEF1Q9HAY2 307 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 TMLHEQ9NVH6 421 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 INTS13Q9NVM9 706 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 GDAP2Q9NXN4 497 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 OBP2AQ9NY56 170 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 HSPBP1Q9NZL4 362 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 PCDHGA2Q9Y5H1 932 aa13.38□□□□□ -0.27
SREBF1-215ENST00000487401 VWA8A3KMH1 1905 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 SHISA7A6NL88 538 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 ACAT1P24752 427 aaKnown RBP13.37□□□□□ -0.27
SREBF1-215ENST00000487401 PCSK1P29120 753 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 WEE1P30291 646 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 RPL10AP62906 217 aaKnown RBP13.37□□□□□ -0.27
SREBF1-215ENST00000487401 PLCB2Q00722 1185 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 MTAPQ13126 283 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 PPP2R5DQ14738 602 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 FAM26FQ5R3K3 315 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 LMBRD2Q68DH5 695 aaPredicted RBP13.37□□□□□ -0.27
SREBF1-215ENST00000487401 ATL3Q6DD88 541 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 CNNM4Q6P4Q7 775 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 CBWD2Q8IUF1 395 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 ADGRF2Q8IZF7 708 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 TOP6BLQ8N6T0 577 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 TTC8Q8TAM2 541 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 SPATA18Q8TC71 538 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 ZNF507Q8TCN5 953 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 HPDLQ96IR7 371 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 FAM84AQ96KN4 292 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 IER2Q9BTL4 223 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 MKNK1Q9BUB5 465 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 CHRDQ9H2X0 955 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 IL21Q9HBE4 155 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 ZSCAN32Q9NX65 697 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 SIX4Q9UIU6 781 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 ZMYM5Q9UJ78 669 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 CFAP45Q9UL16 551 aa13.37□□□□□ -0.27
SREBF1-215ENST00000487401 MAGED2Q9UNF1 606 aaPredicted RBP13.37□□□□□ -0.27
SREBF1-215ENST00000487401 SLC38A8A6NNN8 435 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 ARNTLO00327 626 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 F13A1P00488 732 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 CSH1P0DML2 217 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 CSH2P0DML3 217 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 DDX6P26196 483 aaKnown RBP eCLIP13.36□□□□□ -0.271e-7■■■■■ 60
SREBF1-215ENST00000487401 HOXD13P35453 343 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 AVPR1AP37288 418 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 NRLP54845 237 aa13.36□□□□□ -0.27
SREBF1-215ENST00000487401 SNRPFP62306 86 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms