RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 A0A1W2PQD8 194 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 ENO4A6NNW6 628 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 PODXLO00592 558 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 MARCH6O60337 910 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 KLF8O95600 359 aaPredicted RBP13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 YWHABP31946 246 aaKnown RBP13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 TIE1P35590 1138 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 AVPR1AP37288 418 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 KCNH2Q12809 1159 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 PDGFRLQ15198 375 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 C4orf17Q53FE4 359 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 C6orf118Q5T5N4 469 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 ARHGAP40Q5TG30 622 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 OTUD6AQ7L8S5 288 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 SGMS1Q86VZ5 419 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 TRIML1Q8N9V2 468 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 BAHD1Q8TBE0 780 aaPredicted RBP13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 HSPA12BQ96MM6 686 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 GCNAQ96QF7 691 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 LNPKQ9C0E8 428 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 PDZD7Q9H5P4 517 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 ASB3Q9Y575 518 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 PAXBP1Q9Y5B6 917 aa13.35□□□□□ -0.27
ATPAF1-205ENST00000487193 TCRBV21S2A2A0A5A6 115 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 SGK1O00141 431 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 N4BP3O15049 544 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 DKC1O60832 514 aaKnown RBP eCLIP13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 GLRA2P23416 452 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 MAOBP27338 520 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 MARCKSP29966 332 aaPredicted RBP13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 MCM5P33992 734 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 LIFRP42702 1097 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 CDR1P51861 262 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 CLDN6P56747 220 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 FUT2Q10981 343 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 MYO1EQ12965 1108 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 SLC36A4Q6YBV0 504 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 SYNE3Q6ZMZ3 975 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 SPACA3Q8IXA5 215 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 DDX12PQ92771 950 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 TMEM87BQ96K49 555 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 LPIN3Q9BQK8 851 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 ZMYND12Q9H0C1 365 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 GAREM1Q9H706 876 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 ZDHHC4Q9NPG8 344 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 TM7SF3Q9NS93 570 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 TDP1Q9NUW8 608 aa13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 RBM28Q9NW13 759 aaKnown RBP13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 DUS2Q9NX74 493 aaKnown RBP13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.34□□□□□ -0.27
ATPAF1-205ENST00000487193 SMIM28A0A1B0GU29 152 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 P4HBP07237 508 aaKnown RBP13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 JUPP14923 745 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 LIG1P18858 919 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 CDC25CP30307 473 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 ARL2P36404 184 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 USP11P51784 963 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 EMC10Q5UCC4 262 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 ITIH5Q86UX2 942 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 TTC9BQ8N6N2 239 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 ATAD1Q8NBU5 361 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 APPL2Q8NEU8 664 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 BEST2Q8NFU1 509 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 ADPGKQ9BRR6 497 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 NFKBIZQ9BYH8 718 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 FAM124BQ9H5Z6 455 aaPredicted RBP13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 CPNE5Q9HCH3 593 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 BTBD3Q9Y2F9 522 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 TIMM13Q9Y5L4 95 aaPredicted RBP13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 HEMK1Q9Y5R4 338 aaPredicted RBP13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 WNT6Q9Y6F9 365 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 NBPF19A0A087WUL8 3843 aa13.33□□□□□ -0.28
ATPAF1-205ENST00000487193 LRRIQ4A6NIV6 560 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 CILPO75339 1184 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 GNSP15586 552 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 MCM4P33991 863 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 IFNAR2P48551 515 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 MRPS21P82921 87 aaKnown RBP13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 NR1H3Q13133 447 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 TAF12Q16514 161 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 Q4G0T1 1027 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 CENPPQ6IPU0 288 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 SFTPA1Q8IWL2 248 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 IL17RCQ8NAC3 791 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 FGF11Q92914 225 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 MED8Q96G25 268 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 NAF1Q96HR8 494 aaKnown RBP13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 SUSD3Q96L08 255 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 MTA3Q9BTC8 594 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 FAM117AQ9C073 453 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 FZD8Q9H461 694 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 IL21Q9HBE4 155 aa13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 PRMT7Q9NVM4 692 aaPredicted RBP13.32□□□□□ -0.28
ATPAF1-205ENST00000487193 ANKRD17O75179 2603 aaKnown RBP13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 TDP2O95551 362 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 GNA11P29992 359 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 CCR10P46092 362 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 SCRN1Q12765 414 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 PRPF4BQ13523 1007 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms