RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 DUSP12Q9UNI6 340 aa24.02■■□□□ 1.44
CDHR3-212ENST00000487084 PCDHA5Q9Y5H7 936 aa24.02■■□□□ 1.44
CDHR3-212ENST00000487084 ANHXE9PGG2 379 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 RPL13P26373 211 aaKnown RBP24.01■■□□□ 1.43
CDHR3-212ENST00000487084 TUFMP49411 452 aaKnown RBP24.01■■□□□ 1.43
CDHR3-212ENST00000487084 AP3M2P53677 418 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 MYL6P60660 151 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 DLG4P78352 724 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 INTS6LQ5JSJ4 861 aaKnown RBP24.01■■□□□ 1.43
CDHR3-212ENST00000487084 PRSS36Q5K4E3 855 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 TDRD10Q5VZ19 366 aaKnown RBP24.01■■□□□ 1.43
CDHR3-212ENST00000487084 PARM1Q6UWI2 310 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 SLC44A3Q8N4M1 653 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 SPATA18Q8TC71 538 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 SPPL2BQ8TCT7 592 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 FGF14Q92915 247 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 NXPE3Q969Y0 559 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 DNAJC25Q9H1X3 360 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 TMLHEQ9NVH6 421 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 HSFX1Q9UBD0 423 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 PCDHB5Q9Y5E4 795 aa24.01■■□□□ 1.43
CDHR3-212ENST00000487084 GJA1P17302 382 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 PCSK1P29120 753 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 CCR2P41597 374 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 ADAM9Q13443 819 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 NFIL3Q16649 462 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 WDR72Q3MJ13 1102 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 ZNF658Q5TYW1 1059 aaPredicted RBP24■■□□□ 1.43
CDHR3-212ENST00000487084 MTSS1LQ765P7 747 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 DPH6Q7L8W6 267 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 LEMD2Q8NC56 503 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 SYAP1Q96A49 352 aaPredicted RBP24■■□□□ 1.43
CDHR3-212ENST00000487084 LPIN3Q9BQK8 851 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 PI4K2AQ9BTU6 479 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 NXF1Q9UBU9 619 aaKnown RBP24■■□□□ 1.43
CDHR3-212ENST00000487084 FBXL21Q9UKT6 434 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 HCN4Q9Y3Q4 1203 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 NOTCH4Q99466 2003 aa24■■□□□ 1.43
CDHR3-212ENST00000487084 GABRDO14764 452 aa23.99■■□□□ 1.43
CDHR3-212ENST00000487084 AKAP3O75969 853 aa23.99■■□□□ 1.43
CDHR3-212ENST00000487084 VEPH1Q14D04 833 aa23.99■■□□□ 1.43
CDHR3-212ENST00000487084 NFE2Q16621 373 aaPredicted RBP23.99■■□□□ 1.43
CDHR3-212ENST00000487084 SUGP1Q8IWZ8 645 aaKnown RBP23.99■■□□□ 1.43
CDHR3-212ENST00000487084 FAM186BQ8IYM0 893 aa23.99■■□□□ 1.43
CDHR3-212ENST00000487084 TMC2Q8TDI7 906 aa23.99■■□□□ 1.43
CDHR3-212ENST00000487084 KBTBD7Q8WVZ9 684 aa23.99■■□□□ 1.43
CDHR3-212ENST00000487084 KXD1Q9BQD3 176 aa23.99■■□□□ 1.43
CDHR3-212ENST00000487084 GDE1Q9NZC3 331 aa23.99■■□□□ 1.43
CDHR3-212ENST00000487084 GTF3C4Q9UKN8 822 aa23.99■■□□□ 1.43
CDHR3-212ENST00000487084 TRIOO75962 3097 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 NRG2O14511 850 aaPredicted RBP23.98■■□□□ 1.43
CDHR3-212ENST00000487084 PDGFBP01127 241 aaPredicted RBP23.98■■□□□ 1.43
CDHR3-212ENST00000487084 CFHP08603 1231 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 PDGFRBP09619 1106 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 HAPLN1P10915 354 aaPredicted RBP23.98■■□□□ 1.43
CDHR3-212ENST00000487084 KRT13P13646 458 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 ATICP31939 592 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 PRCPP42785 496 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 VAMP7P51809 220 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 PSMC1P62191 440 aaKnown RBP23.98■■□□□ 1.43
CDHR3-212ENST00000487084 NCOA4Q13772 614 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 TAF12Q16514 161 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 CCDC142Q17RM4 750 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 ZNF699Q32M78 642 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 ZCWPW2Q504Y3 356 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 ISM2Q6H9L7 571 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 BMP8AQ7Z5Y6 402 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 ITIH5Q86UX2 942 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 GIPC2Q8TF65 315 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 PSMG2Q969U7 264 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 EEF2KMTQ96G04 330 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 SYT15Q9BQS2 421 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 RPP25Q9BUL9 199 aaKnown RBP23.98■■□□□ 1.43
CDHR3-212ENST00000487084 SNX25Q9H3E2 840 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 SLITRK6Q9H5Y7 841 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 ASB3Q9Y575 518 aa23.98■■□□□ 1.43
CDHR3-212ENST00000487084 C4BPAP04003 597 aaKnown RBP23.97■■□□□ 1.43
CDHR3-212ENST00000487084 TRIM49P0CI25 452 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 TRIM49CP0CI26 452 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 ATF6P18850 670 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 WARSP23381 471 aaKnown RBP23.97■■□□□ 1.43
CDHR3-212ENST00000487084 LMO2P25791 158 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 PSMC2P35998 433 aaKnown RBP23.97■■□□□ 1.43
CDHR3-212ENST00000487084 EPHA5P54756 1037 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 CLDN10P78369 228 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 TEAD2Q15562 447 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 EDRF1Q3B7T1 1238 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 INTS8Q75QN2 995 aaKnown RBP23.97■■□□□ 1.43
CDHR3-212ENST00000487084 LIMS2Q7Z4I7 341 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 DNAJB7Q7Z6W7 309 aaPredicted RBP23.97■■□□□ 1.43
CDHR3-212ENST00000487084 TMC8Q8IU68 726 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 SPATA2LQ8IUW3 424 aaPredicted RBP23.97■■□□□ 1.43
CDHR3-212ENST00000487084 OR6B3Q8NGW1 331 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 SPATA20Q8TB22 786 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 GPR152Q8TDT2 470 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 ELMO3Q96BJ8 720 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 TSG101Q99816 390 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 MRPL45Q9BRJ2 306 aaKnown RBP23.97■■□□□ 1.43
CDHR3-212ENST00000487084 XYLT2Q9H1B5 865 aa23.97■■□□□ 1.43
CDHR3-212ENST00000487084 MFSD1Q9H3U5 465 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms