RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 SURF1Q15526 300 aa14.07□□□□□ -0.16
NR1H3-223ENST00000486991 PSMD5Q16401 504 aa14.07□□□□□ -0.16
NR1H3-223ENST00000486991 RSPO2Q6UXX9 243 aaPredicted RBP14.07□□□□□ -0.16
NR1H3-223ENST00000486991 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.07□□□□□ -0.16
NR1H3-223ENST00000486991 GRASPQ7Z6J2 395 aaPredicted RBP14.07□□□□□ -0.16
NR1H3-223ENST00000486991 PLEKHO2Q8TD55 490 aa14.07□□□□□ -0.16
NR1H3-223ENST00000486991 BORCS6Q96GS4 357 aa14.07□□□□□ -0.16
NR1H3-223ENST00000486991 FNBP1Q96RU3 617 aa14.07□□□□□ -0.16
NR1H3-223ENST00000486991 PRKD2Q9BZL6 878 aa14.07□□□□□ -0.16
NR1H3-223ENST00000486991 TAB2Q9NYJ8 693 aa14.07□□□□□ -0.16
NR1H3-223ENST00000486991 WNT16Q9UBV4 365 aa14.07□□□□□ -0.16
NR1H3-223ENST00000486991 FAM186AA6NE01 2351 aa14.07□□□□□ -0.16
NR1H3-223ENST00000486991 LRRIQ3A6PVS8 624 aaPredicted RBP14.06□□□□□ -0.16
NR1H3-223ENST00000486991 PES1O00541 588 aaKnown RBP14.06□□□□□ -0.16
NR1H3-223ENST00000486991 PODXLO00592 558 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 B3GAT3O94766 335 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 SRFP11831 508 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 PRKCSHP14314 528 aaPredicted RBP14.06□□□□□ -0.16
NR1H3-223ENST00000486991 TNNI1P19237 187 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 RFX1P22670 979 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 TKTP29401 623 aaKnown RBP14.06□□□□□ -0.16
NR1H3-223ENST00000486991 BRCC3P46736 316 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 DLG4P78352 724 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 POU5F1Q01860 360 aaKnown RBP14.06□□□□□ -0.16
NR1H3-223ENST00000486991 HTR4Q13639 388 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 KRT31Q15323 416 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 LMBRD2Q68DH5 695 aaPredicted RBP14.06□□□□□ -0.16
NR1H3-223ENST00000486991 USP37Q86T82 979 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 CEP57Q86XR8 500 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 TRIM59Q8IWR1 403 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 CD302Q8IX05 232 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 TMC2Q8TDI7 906 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 PARD3BQ8TEW8 1205 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 CGRRF1Q99675 332 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 TUBGCP2Q9BSJ2 902 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 RHOBTB2Q9BYZ6 727 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 FOXQ1Q9C009 403 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 MMRN2Q9H8L6 949 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 PLEKHA5Q9HAU0 1116 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 FBXW11Q9UKB1 542 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.06□□□□□ -0.16
NR1H3-223ENST00000486991 NUMBLQ9Y6R0 609 aa14.06□□□□□ -0.16
NR1H3-223ENST00000486991 ANHXE9PGG2 379 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 CCL16O15467 120 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 TBC1D4O60343 1298 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 ZMYND10O75800 440 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 SERPINC1P01008 464 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 TPM2P07951 284 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 GLULP15104 373 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 FSHRP23945 695 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 COPB1P53618 953 aaKnown RBP14.05□□□□□ -0.16
NR1H3-223ENST00000486991 PLCB2Q00722 1185 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 MAN2A1Q16706 1144 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 JADE1Q6IE81 842 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 PARM1Q6UWI2 310 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 FGF14Q92915 247 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 KIF12Q96FN5 646 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 VPS16Q9H269 839 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 ASB7Q9H672 318 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 ZDHHC7Q9NXF8 308 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 MTRRQ9UBK8 725 aa14.05□□□□□ -0.16
NR1H3-223ENST00000486991 LIMA1Q9UHB6 759 aaKnown RBP14.05□□□□□ -0.16
NR1H3-223ENST00000486991 GVINP1Q7Z2Y8 2422 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 GOLGA6L3A6NEY3 463 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 PPEF2O14830 753 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 STX10O60499 249 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 NFICP08651 508 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 TMEM191BP0C7N4 346 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 LRPAP1P30533 357 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 RPL9P32969 192 aaKnown RBP14.04□□□□□ -0.16
NR1H3-223ENST00000486991 AARSP49588 968 aaKnown RBP eCLIP14.04□□□□□ -0.16
NR1H3-223ENST00000486991 GUCY2FP51841 1108 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 GPC5P78333 572 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 TFAMQ00059 246 aaKnown RBP14.04□□□□□ -0.16
NR1H3-223ENST00000486991 FANCCQ00597 558 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 KCNH2Q12809 1159 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 MRPL58Q14197 206 aaKnown RBP14.04□□□□□ -0.16
NR1H3-223ENST00000486991 TMEM132DQ14C87 1099 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 WDR49Q8IV35 697 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 EFCAB13Q8IY85 973 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 ITFG1Q8TB96 612 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 SLC35C1Q96A29 364 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 FAM84AQ96KN4 292 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 SUSD3Q96L08 255 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 TSPAN18Q96SJ8 248 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 ARHGEF3Q9NR81 526 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 HCFC1R1Q9NWW0 138 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.04□□□□□ -0.16
NR1H3-223ENST00000486991 DLGAP2Q9P1A6 1054 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 POLIQ9UNA4 740 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 PTPRJQ12913 1337 aa14.04□□□□□ -0.16
NR1H3-223ENST00000486991 XPOTO43592 962 aaKnown RBP14.03□□□□□ -0.16
NR1H3-223ENST00000486991 TNNC2P02585 160 aa14.03□□□□□ -0.16
NR1H3-223ENST00000486991 AFPP02771 609 aaKnown RBP14.03□□□□□ -0.16
NR1H3-223ENST00000486991 ID4P47928 161 aa14.03□□□□□ -0.16
NR1H3-223ENST00000486991 GCLMP48507 274 aa14.03□□□□□ -0.16
NR1H3-223ENST00000486991 ENPEPQ07075 957 aa14.03□□□□□ -0.16
NR1H3-223ENST00000486991 PPP3CAQ08209 521 aa14.03□□□□□ -0.16
NR1H3-223ENST00000486991 RAB33AQ14088 237 aa14.03□□□□□ -0.16
NR1H3-223ENST00000486991 DUOXA2Q1HG44 320 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms