RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 CAPN10Q9HC96 672 aa9.22□□□□□ -0.93
APTX-228ENST00000486724 BRMS1Q9HCU9 246 aa9.22□□□□□ -0.93
APTX-228ENST00000486724 GEMIN8Q9NWZ8 242 aaKnown RBP9.22□□□□□ -0.93
APTX-228ENST00000486724 OBP2AQ9NY56 170 aa9.22□□□□□ -0.93
APTX-228ENST00000486724 PILRBQ9UKJ0 227 aa9.22□□□□□ -0.93
APTX-228ENST00000486724 KCNJ14Q9UNX9 436 aa9.22□□□□□ -0.93
APTX-228ENST00000486724 COL4A3BPQ9Y5P4 624 aa9.22□□□□□ -0.93
APTX-228ENST00000486724 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.22□□□□□ -0.93
APTX-228ENST00000486724 ATG2BQ96BY7 2078 aa9.22□□□□□ -0.93
APTX-228ENST00000486724 KIAA1549LQ6ZVL6 1849 aa9.21□□□□□ -0.93
APTX-228ENST00000486724 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 E9PAM4 449 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 ARHGAP33O14559 1287 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 MAFO75444 373 aaPredicted RBP9.21□□□□□ -0.94
APTX-228ENST00000486724 ABLIM3O94929 683 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 SLFN14P0C7P3 912 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 C6P13671 934 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 ATF2P15336 505 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 AKAP5P24588 427 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 AXLP30530 894 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 IL12RB1P42701 662 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 NAPAP54920 295 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 NLRP5P59047 1200 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 AMPD2Q01433 879 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 CACNB1Q02641 598 aaPredicted RBP9.21□□□□□ -0.94
APTX-228ENST00000486724 GNL2Q13823 731 aaKnown RBP9.21□□□□□ -0.94
APTX-228ENST00000486724 ANO7Q6IWH7 933 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 SLC8B1Q6J4K2 584 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 NOSTRINQ8IVI9 506 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 ARID3BQ8IVW6 561 aaPredicted RBP9.21□□□□□ -0.94
APTX-228ENST00000486724 OR2I1PQ8NGU4 316 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 TNFRSF25Q93038 417 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 EXOC4Q96A65 974 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 LRRC3BQ96PB8 259 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 CEP89Q96ST8 783 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 PI4K2AQ9BTU6 479 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 NIFKQ9BYG3 293 aaKnown RBP9.21□□□□□ -0.94
APTX-228ENST00000486724 DISC1Q9NRI5 854 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 NXF1Q9UBU9 619 aaKnown RBP9.21□□□□□ -0.94
APTX-228ENST00000486724 PCDHA4Q9UN74 947 aa9.21□□□□□ -0.94
APTX-228ENST00000486724 ABCA12Q86UK0 2595 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 FLNCQ14315 2725 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 BTBD18B2RXH4 712 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 M0R2N6 131 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 TSPAN1O60635 241 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 PRKCBP05771 671 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 SYPP08247 313 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 HLA-EP13747 358 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 ITPKAP23677 461 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 GNA11P29992 359 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 KRT85P78386 507 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 DNM1Q05193 864 aaKnown RBP9.2□□□□□ -0.94
APTX-228ENST00000486724 NCBP1Q09161 790 aaKnown RBP9.2□□□□□ -0.94
APTX-228ENST00000486724 AP3B2Q13367 1082 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 PCBP1Q15365 356 aaKnown RBP eCLIP9.2□□□□□ -0.94
APTX-228ENST00000486724 XKR3Q5GH77 459 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 MARCH9Q86YJ5 346 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 FMNL3Q8IVF7 1028 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 BLIDQ8IZY5 108 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 KRT222Q8N1A0 295 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 MDGA1Q8NFP4 955 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 BICD2Q8TD16 824 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 BPIFB1Q8TDL5 484 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 OXER1Q8TDS5 423 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 SPIRE2Q8WWL2 714 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 BAP1Q92560 729 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 NXPE2Q96DL1 559 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
APTX-228ENST00000486724 ZNF396Q96N95 335 aaPredicted RBP9.2□□□□□ -0.94
APTX-228ENST00000486724 FNBP1Q96RU3 617 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 CSRNP2Q9H175 543 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 C6orf50Q9HD87 102 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 RIC8AQ9NPQ8 531 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 THG1LQ9NWX6 298 aaKnown RBP9.2□□□□□ -0.94
APTX-228ENST00000486724 KLK14Q9P0G3 267 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 CEP72Q9P209 647 aa9.2□□□□□ -0.94
APTX-228ENST00000486724 DOPEY2Q9Y3R5 2298 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 NOTCH2Q04721 2471 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 A0A1W2PRU2 124 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 TMEM150BA6NC51 233 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 SMCO2A6NFE2 343 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 CBFA2T3O75081 653 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 GJB3O75712 270 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 SEC24AO95486 1093 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 SRGAP2CP0DJJ0 459 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 GP1BBP13224 206 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 TKTP29401 623 aaKnown RBP9.19□□□□□ -0.94
APTX-228ENST00000486724 SFNP31947 248 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 P2RY2P41231 377 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 ADCY7P51828 1080 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 CXADRP78310 365 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 TWF1Q12792 350 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 NR5A1Q13285 461 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 TERF2Q15554 542 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 FOXD4L6Q3SYB3 417 aaPredicted RBP9.19□□□□□ -0.94
APTX-228ENST00000486724 RILPL1Q5EBL4 403 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 FAM173BQ6P4H8 233 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 FOXD4L3Q6VB84 417 aaPredicted RBP9.19□□□□□ -0.94
APTX-228ENST00000486724 GPIHBP1Q8IV16 184 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 OLIG1Q8TAK6 271 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms