RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 TMC7Q7Z402 723 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 CROCCP2Q86T23 111 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 ADHFE1Q8IWW8 467 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 SYT2Q8N9I0 419 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-208ENST00000486533 CCDC26Q8TAB7 109 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 POP1Q99575 1024 aaKnown RBP9.64□□□□□ -0.87
COL12A1-208ENST00000486533 HSD17B14Q9BPX1 270 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 POLR3CQ9BUI4 534 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-208ENST00000486533 TRAIPQ9BWF2 469 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 MINDY3Q9H8M7 445 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 NLRC4Q9NPP4 1024 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 KCND2Q9NZV8 630 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 CLEC1BQ9P126 229 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 DUSP10Q9Y6W6 482 aa9.64□□□□□ -0.87
COL12A1-208ENST00000486533 FAM86C2PA6NEL3 165 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 MEIS3P2A8K0S8 358 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 NT5C1B-RDH14C9J2C7 533 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 PI4K2BG5E9Z4 385 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 PGRMC1O00264 195 aaKnown RBP9.63□□□□□ -0.87
COL12A1-208ENST00000486533 ASAP2O43150 1006 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 GLP2RO95838 553 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 SRGAP2BP0DMP2 458 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 MATR3P43243 847 aaKnown RBP eCLIP9.63□□□□□ -0.87
COL12A1-208ENST00000486533 BCAR1P56945 870 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 KCNH2Q12809 1159 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 MXD4Q14582 209 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-208ENST00000486533 SPDYCQ5MJ68 293 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 KDM7AQ6ZMT4 941 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 MAATS1Q7Z4T9 603 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 SLC39A11Q8N1S5 342 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 SMRP1Q8NCR6 262 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 C3orf20Q8ND61 904 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 ACTRT1Q8TDG2 376 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 PIGOQ8TEQ8 1089 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 RSPH1Q8WYR4 309 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 HPS3Q969F9 1004 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 PGBD4Q96DM1 585 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 TMEM169Q96HH4 297 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 MSLNLQ96KJ4 702 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 CDCA3Q99618 268 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-208ENST00000486533 MKNK1Q9BUB5 465 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 GANQ9H2C0 597 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 KCTD10Q9H3F6 313 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 SLITRK6Q9H5Y7 841 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 NGRNQ9NPE2 291 aaKnown RBP9.63□□□□□ -0.87
COL12A1-208ENST00000486533 RAPGEFL1Q9UHV5 662 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 PCDHB2Q9Y5E7 798 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 GOLGA6L10A0A0M3HER8 536 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 HIDE1A8MVS5 230 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 INO80B-WBP1J3KQ70 363 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 FSCN2O14926 492 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 EPHB6O15197 1021 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 BUB1O43683 1085 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 ZNF623O75123 536 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 DGAT1O75907 488 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 LYPLA2O95372 231 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 EYA4O95677 639 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 H2AFZP0C0S5 128 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 ALADP13716 330 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 STAT1P42224 750 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 RARRES1P49788 294 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 SLC12A3P55017 1021 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 GNGT1P63211 74 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 BIRC3Q13489 604 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 ALCAMQ13740 583 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 TFDP1Q14186 410 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 DUSP6Q16828 381 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 NOMO2Q5JPE7 1267 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 LLGL2Q6P1M3 1020 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 H2AFVQ71UI9 128 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 NELFCDQ8IXH7 590 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 C10orf67Q8IYJ2 551 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 VN1R2Q8NFZ6 395 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 URGCPQ8TCY9 931 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 SCFD1Q8WVM8 642 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 LRFN3Q9BTN0 628 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 ZHX3Q9H4I2 956 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 TUFT1Q9NNX1 390 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 XPNPEP1Q9NQW7 623 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 OLFML3Q9NRN5 406 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 RBM12Q9NTZ6 932 aaKnown RBP9.63□□□□□ -0.87
COL12A1-208ENST00000486533 ANKEF1Q9NU02 776 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 TBC1D13Q9NVG8 400 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 DMGDHQ9UI17 866 aaKnown RBP9.63□□□□□ -0.87
COL12A1-208ENST00000486533 GGA2Q9UJY4 613 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 TFR2Q9UP52 801 aa9.63□□□□□ -0.87
COL12A1-208ENST00000486533 WDFY4Q6ZS81 3184 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 E9PMD0 336 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 AGPSO00116 658 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 DCXO43602 365 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 NOL4O94818 638 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 FAM13AO94988 1023 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 KIF4AO95239 1232 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 CPP00450 1065 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 HOXA11P31270 313 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-208ENST00000486533 PSMC2P35998 433 aaKnown RBP9.62□□□□□ -0.87
COL12A1-208ENST00000486533 NOP2P46087 812 aaKnown RBP9.62□□□□□ -0.87
COL12A1-208ENST00000486533 IRAK1P51617 712 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 PTENP60484 403 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 GUCY2DQ02846 1103 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms