RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CSDE1O75534 798 aaKnown RBP12.66□□□□□ -0.38
PKP4-213ENST00000486254 NPTXRO95502 500 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 GGCXP38435 758 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 PNPLA4P41247 253 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 FCGRTP55899 365 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 CRHR2Q13324 411 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 HLTFQ14527 1009 aaKnown RBP eCLIP12.66□□□□□ -0.38
PKP4-213ENST00000486254 CCL14Q16627 93 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 PTPN20Q4JDL3 420 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 PRAMEF19Q5SWL8 479 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 DRICH1Q6PGQ1 229 aaPredicted RBP12.66□□□□□ -0.38
PKP4-213ENST00000486254 CCDC137Q6PK04 289 aaKnown RBP12.66□□□□□ -0.38
PKP4-213ENST00000486254 LCLAT1Q6UWP7 414 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 SESTD1Q86VW0 696 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 RCOR2Q8IZ40 523 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 ZDHHC14Q8IZN3 488 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 RUFY1Q96T51 708 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 MTG1Q9BT17 334 aaPredicted RBP12.66□□□□□ -0.38
PKP4-213ENST00000486254 NT5C1AQ9BXI3 368 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 TXLNGYQ9BZA5 131 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 TRIM7Q9C029 511 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 FAM49AQ9H0Q0 323 aaPredicted RBP12.66□□□□□ -0.38
PKP4-213ENST00000486254 ST7Q9NRC1 585 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 ZDHHC18Q9NUE0 388 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 SCN1AP35498 2009 aa12.66□□□□□ -0.38
PKP4-213ENST00000486254 A6NNZ2 444 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 PPFIA2O75334 1257 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 FAM153BP0C7A2 387 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 RARAP10276 462 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 CD19P15391 556 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 CYP2B6P20813 491 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 MRPS25P82663 173 aaKnown RBP12.65□□□□□ -0.38
PKP4-213ENST00000486254 ZNF252P-AS1Q0IIN9 211 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 TUBB8Q3ZCM7 444 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 FAM153CQ494X1 144 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 SGO2Q562F6 1265 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 MFSD14CQ5VZR4 134 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 DCUN1D2Q6PH85 259 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 RUFY4Q6ZNE9 571 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 LIMS2Q7Z4I7 341 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 TMC3Q7Z5M5 1100 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 REM2Q8IYK8 340 aaPredicted RBP12.65□□□□□ -0.38
PKP4-213ENST00000486254 TSEN2Q8NCE0 465 aaKnown RBP12.65□□□□□ -0.38
PKP4-213ENST00000486254 STK32AQ8WU08 396 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 C18orf8Q96DM3 657 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 MCRS1Q96EZ8 462 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 ZNF560Q96MR9 790 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 FMO2Q99518 471 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 OSMRQ99650 979 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 FRMD8P1Q9BZ68 369 aaPredicted RBP12.65□□□□□ -0.38
PKP4-213ENST00000486254 ELOVL4Q9GZR5 314 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 TSPYL1Q9H0U9 437 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 CYLDQ9NQC7 956 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 GDAP2Q9NXN4 497 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 FAM153AQ9UHL3 310 aa12.65□□□□□ -0.38
PKP4-213ENST00000486254 DAPK3O43293 454 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 RECQL4O94761 1208 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 ECEL1O95672 775 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 MYL3P08590 195 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 SCNN1AP37088 669 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 GPD2P43304 727 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 SNX16P57768 344 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 LMNB2Q03252 620 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 PDCLQ13371 301 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 CCNG2Q16589 344 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 EMC10Q5UCC4 262 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 DENND1BQ6P3S1 775 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 TTC27Q6P3X3 843 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 CPNE8Q86YQ8 564 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 IPO4Q8TEX9 1081 aaKnown RBP12.64□□□□□ -0.39
PKP4-213ENST00000486254 PPP1R16BQ96T49 567 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 NCAPGQ9BPX3 1015 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 CELF4Q9BZC1 486 aaKnown RBP12.64□□□□□ -0.39
PKP4-213ENST00000486254 TRIM6Q9C030 488 aaPredicted RBP12.64□□□□□ -0.39
PKP4-213ENST00000486254 WHRNQ9P202 907 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 ADAM21Q9UKJ8 722 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 PIRO00625 290 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 NDC80O14777 642 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 TREHO43280 583 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 MICAL2O94851 1124 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 GAS8O95995 478 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 KRT7P08729 469 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 CST5P28325 142 aaPredicted RBP12.64□□□□□ -0.39
PKP4-213ENST00000486254 RAP1GAPP47736 663 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 EIF3BP55884 814 aaKnown RBP12.64□□□□□ -0.39
PKP4-213ENST00000486254 TAS2R40P59535 323 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 RPL7AP62424 266 aaKnown RBP12.64□□□□□ -0.39
PKP4-213ENST00000486254 CAV1Q03135 178 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 DMTNQ08495 405 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 PTK6Q13882 451 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 HIC1Q14526 733 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 PKDCCQ504Y2 493 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 ZNF394Q53GI3 561 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 ARHGAP17Q68EM7 881 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 AADACL2Q6P093 401 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 CROCCP2Q86T23 111 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 XYLT1Q86Y38 959 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 C7orf31Q8N865 590 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 CCHCR1Q8TD31 782 aa12.64□□□□□ -0.39
PKP4-213ENST00000486254 DNAJB3Q8WWF6 145 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms