RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 ARSAP15289 507 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 PTGER3P43115 390 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 GALK1P51570 392 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 UBE2HP62256 183 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 CYP4F8P98187 520 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 SLC39A14Q15043 492 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 CTXN3Q4LDR2 81 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 TTC38Q5R3I4 469 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 GPR158Q5T848 1215 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 TPGS2Q68CL5 300 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 SYT13Q7L8C5 426 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 KRT25Q7Z3Z0 450 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 HAUS6Q7Z4H7 955 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 EXOC8Q8IYI6 725 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 TTC9BQ8N6N2 239 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 LEMD2Q8NC56 503 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 BICD2Q8TD16 824 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 BPIFB1Q8TDL5 484 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 PGLYRP2Q96PD5 576 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 FAM83CQ9BQN1 747 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 POLR3FQ9H1D9 316 aaPredicted RBP10.71□□□□□ -0.69
SND1-213ENST00000486037 EBF3Q9H4W6 596 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.71□□□□□ -0.69
SND1-213ENST00000486037 GKN1Q9NS71 199 aa10.71□□□□□ -0.69
SND1-213ENST00000486037 NOL7Q9UMY1 257 aaKnown RBP10.71□□□□□ -0.69
SND1-213ENST00000486037 ATMQ13315 3056 aa10.71□□□□□ -0.7
SND1-213ENST00000486037 MYO18BQ8IUG5 2567 aa10.71□□□□□ -0.7
SND1-213ENST00000486037 PCDH15Q96QU1 1955 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 SPTLC2O15270 562 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 SOAT2O75908 522 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 CD59P13987 128 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 HNRNPLP14866 589 aaKnown RBP eCLIP10.7□□□□□ -0.74e-6■■■□□ 15.5
SND1-213ENST00000486037 TRAPPC10P48553 1259 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 RUNX3Q13761 415 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 ZNF174Q15697 407 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 INF2Q27J81 1249 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 ZNF423Q2M1K9 1284 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 KLHL40Q2TBA0 621 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 SKOR2Q2VWA4 1001 aaPredicted RBP10.7□□□□□ -0.7
SND1-213ENST00000486037 RLN3Q8WXF3 142 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 SLC39A7Q92504 469 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 FNBP1Q96RU3 617 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 ATXN3LQ9H3M9 355 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 FZD8Q9H461 694 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 KCNMB3Q9NPA1 279 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 OBP2AQ9NY56 170 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 DDX25Q9UHL0 483 aaKnown RBP10.7□□□□□ -0.7
SND1-213ENST00000486037 PCDHA7Q9UN72 937 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 CCL26Q9Y258 94 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 RAI2Q9Y5P3 530 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 COL12A1Q99715 3063 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 PTPRBP23467 1997 aa10.7□□□□□ -0.7
SND1-213ENST00000486037 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 SMIM28A0A1B0GU29 152 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 LRRIQ4A6NIV6 560 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 PODXLO00592 558 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 TRAPPC3O43617 180 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 PPP6R2O75170 966 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 MBD3O95983 291 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 FTH1P19P0C7X4 201 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 MARCKSP29966 332 aaPredicted RBP10.69□□□□□ -0.7
SND1-213ENST00000486037 CDR1P51861 262 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 LMAN2Q12907 356 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 EPHA7Q15375 998 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 CDCA2Q69YH5 1023 aaPredicted RBP10.69□□□□□ -0.7
SND1-213ENST00000486037 NCAPH2Q6IBW4 605 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 ANO7Q6IWH7 933 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 MAEAQ7L5Y9 396 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 OTUD6AQ7L8S5 288 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 RASSF3Q86WH2 238 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 TMEFF1Q8IYR6 380 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 CEP120Q8N960 986 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 MDGA1Q8NFP4 955 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 BEST2Q8NFU1 509 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 ADAMTS14Q8WXS8 1223 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 BSNDQ8WZ55 320 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 HAS1Q92839 578 aa10.69□□□□□ -0.7
SND1-213ENST00000486037 ZMAT2Q96NC0 199 aaKnown RBP10.69□□□□□ -0.7
SND1-213ENST00000486037 GTPBP2Q9BX10 602 aaKnown RBP10.69□□□□□ -0.7
SND1-213ENST00000486037 NUSAP1Q9BXS6 441 aaKnown RBP10.69□□□□□ -0.7
SND1-213ENST00000486037 PRMT7Q9NVM4 692 aaPredicted RBP10.69□□□□□ -0.7
SND1-213ENST00000486037 H7C4K7 107 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 SYN3O14994 580 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 N4BP3O15049 544 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 SH3BP5O60239 455 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 DKC1O60832 514 aaKnown RBP eCLIP10.68□□□□□ -0.75e-7■■□□□ 12.9
SND1-213ENST00000486037 SLITRK3O94933 977 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 CPB1P15086 417 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 LIG1P18858 919 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 GABRR2P28476 465 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 ME1P48163 572 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 DUSP4Q13115 394 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 FAM187BQ17R55 369 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 USP39Q53GS9 565 aaKnown RBP10.68□□□□□ -0.7
SND1-213ENST00000486037 SLC23A3Q6PIS1 610 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 TPH2Q8IWU9 490 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 ZNF843Q8N446 348 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 C4orf32Q8N8J7 132 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 TSTD1Q8NFU3 115 aa10.68□□□□□ -0.7
SND1-213ENST00000486037 DDX12PQ92771 950 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms