RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 DPP7Q9UHL4 492 aa25.28■■□□□ 1.64
ABCF3-216ENST00000485921 TPM2P07951 284 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 PDGFRBP09619 1106 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 GPR17Q13304 367 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 SLC39A12Q504Y0 691 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 ANKRD54Q6NXT1 300 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 ELMSAN1Q6PJG2 1045 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 RNF19BQ6ZMZ0 732 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 GBP6Q6ZN66 633 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 LUZP1Q86V48 1076 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 NT5C1BQ96P26 610 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 CRACR2AQ9BSW2 395 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 VPS16Q9H269 839 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 PLEKHA4Q9H4M7 779 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 DZANK1Q9NVP4 752 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 GCNT4Q9P109 453 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 LIMA1Q9UHB6 759 aaKnown RBP25.27■■□□□ 1.64
ABCF3-216ENST00000485921 FBXW11Q9UKB1 542 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 COG5Q9UP83 839 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 NME7Q9Y5B8 376 aa25.27■■□□□ 1.64
ABCF3-216ENST00000485921 PLXNA3P51805 1871 aa25.26■■□□□ 1.63
ABCF3-216ENST00000485921 GTPBP10A4D1E9 387 aaKnown RBP25.26■■□□□ 1.63
ABCF3-216ENST00000485921 ATP1A3P13637 1013 aa25.26■■□□□ 1.63
ABCF3-216ENST00000485921 INTS6LQ5JSJ4 861 aaKnown RBP25.26■■□□□ 1.63
ABCF3-216ENST00000485921 LRRTM3Q86VH5 581 aa25.26■■□□□ 1.63
ABCF3-216ENST00000485921 DCP1BQ8IZD4 617 aaKnown RBP25.26■■□□□ 1.63
ABCF3-216ENST00000485921 FAM200AQ8TCP9 573 aa25.26■■□□□ 1.63
ABCF3-216ENST00000485921 HDAC7Q8WUI4 952 aa25.26■■□□□ 1.63
ABCF3-216ENST00000485921 PGLYRP2Q96PD5 576 aa25.26■■□□□ 1.63
ABCF3-216ENST00000485921 PRDM6Q9NQX0 595 aa25.26■■□□□ 1.63
ABCF3-216ENST00000485921 AFF4Q9UHB7 1163 aaKnown RBP25.26■■□□□ 1.63
ABCF3-216ENST00000485921 CDH9Q9ULB4 789 aa25.26■■□□□ 1.63
ABCF3-216ENST00000485921 SPDYE4A6NLX3 237 aa25.25■■□□□ 1.63
ABCF3-216ENST00000485921 A8MXQ7 604 aa25.25■■□□□ 1.63
ABCF3-216ENST00000485921 ATF2P15336 505 aa25.25■■□□□ 1.63
ABCF3-216ENST00000485921 KCNA5P22460 613 aa25.25■■□□□ 1.63
ABCF3-216ENST00000485921 ELF1P32519 619 aa25.25■■□□□ 1.63
ABCF3-216ENST00000485921 COPB1P53618 953 aaKnown RBP25.25■■□□□ 1.63
ABCF3-216ENST00000485921 ZNF445P59923 1031 aa25.25■■□□□ 1.63
ABCF3-216ENST00000485921 ADCY1Q08828 1119 aa25.25■■□□□ 1.63
ABCF3-216ENST00000485921 EXOC3L4Q17RC7 722 aa25.25■■□□□ 1.63
ABCF3-216ENST00000485921 SYT15Q9BQS2 421 aa25.25■■□□□ 1.63
ABCF3-216ENST00000485921 LRRC10BA6NIK2 292 aa25.24■■□□□ 1.63
ABCF3-216ENST00000485921 ATP2C2O75185 946 aa25.24■■□□□ 1.63
ABCF3-216ENST00000485921 CD58P19256 250 aa25.24■■□□□ 1.63
ABCF3-216ENST00000485921 SLC9A1P19634 815 aa25.24■■□□□ 1.63
ABCF3-216ENST00000485921 PSMC1P62191 440 aaKnown RBP25.24■■□□□ 1.63
ABCF3-216ENST00000485921 TPM4P67936 248 aa25.24■■□□□ 1.63
ABCF3-216ENST00000485921 CUL2Q13617 745 aa25.24■■□□□ 1.63
ABCF3-216ENST00000485921 LIN9Q5TKA1 542 aa25.24■■□□□ 1.63
ABCF3-216ENST00000485921 PKMYT1Q99640 499 aa25.24■■□□□ 1.63
ABCF3-216ENST00000485921 ARID3AQ99856 593 aa25.24■■□□□ 1.63
ABCF3-216ENST00000485921 CYP4F11Q9HBI6 524 aa25.24■■□□□ 1.63
ABCF3-216ENST00000485921 TMLHEQ9NVH6 421 aa25.24■■□□□ 1.63
ABCF3-216ENST00000485921 MAFFQ9ULX9 164 aa25.24■■□□□ 1.63
ABCF3-216ENST00000485921 COL6A3P12111 3177 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 H3BQ06 376 aaPredicted RBP25.23■■□□□ 1.63
ABCF3-216ENST00000485921 SEC24AO95486 1093 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 VNN2O95498 520 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 HOXB8P17481 243 aaPredicted RBP25.23■■□□□ 1.63
ABCF3-216ENST00000485921 TBXAS1P24557 533 aaPredicted RBP25.23■■□□□ 1.63
ABCF3-216ENST00000485921 CDR1P51861 262 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 NDST1P52848 882 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 INCA1Q0VD86 236 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 SMARCB1Q12824 385 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 FAM171BQ6P995 826 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 SYCE2Q6PIF2 218 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 TRIM65Q6PJ69 517 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 UNC93AQ86WB7 457 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 TCEAL8Q8IYN2 117 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 PPM1KQ8N3J5 372 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 C12orf76Q8N812 135 aaPredicted RBP25.23■■□□□ 1.63
ABCF3-216ENST00000485921 ATAD1Q8NBU5 361 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 MSLNLQ96KJ4 702 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 DPEP3Q9H4B8 488 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 SFXN1Q9H9B4 322 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 CRTAC1Q9NQ79 661 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 GTF3C4Q9UKN8 822 aa25.23■■□□□ 1.63
ABCF3-216ENST00000485921 BRWD1Q9NSI6 2320 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 MYBPHLA2RUH7 354 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 MTMR11A4FU01 709 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 GOLGA6L19H0YKK7 550 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 PRRG1O14668 218 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 ZMYND10O75800 440 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 C8AP07357 584 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 PTPN1P18031 435 aaKnown RBP25.22■■□□□ 1.63
ABCF3-216ENST00000485921 PON1P27169 355 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 CLUL1Q15846 466 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 NFE2Q16621 373 aaPredicted RBP25.22■■□□□ 1.63
ABCF3-216ENST00000485921 UVSSAQ2YD98 709 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 CCDC149Q6ZUS6 474 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 APTXQ7Z2E3 356 aaKnown RBP25.22■■□□□ 1.63
ABCF3-216ENST00000485921 ARHGEF19Q8IW93 802 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 TTC39CQ8N584 583 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 SLC7A14Q8TBB6 771 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 C2orf15Q8WU43 125 aaKnown RBP25.22■■□□□ 1.63
ABCF3-216ENST00000485921 APOL5Q9BWW9 433 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 CISHQ9NSE2 258 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 HMGXB4Q9UGU5 601 aa25.22■■□□□ 1.63
ABCF3-216ENST00000485921 CD207Q9UJ71 328 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms