RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 ST7Q9NRC1 585 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 IL17RBQ9NRM6 502 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 PARPBPQ9NWS1 579 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 GALNT8Q9NY28 637 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 FBXO10Q9UK96 956 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 NOL7Q9UMY1 257 aaKnown RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 SRPK3Q9UPE1 567 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 CEP350Q5VT06 3117 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 ARFGEF1Q9Y6D6 1849 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 BRCA1P38398 1863 aaKnown RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 NAV1Q8NEY1 1877 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 ESYT2A0FGR8 921 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 DDTLA6NHG4 134 aaPredicted RBP4.87□□□□□ -1.63
SPTA1-206ENST00000484520 TCP10L2B9ZVM9 353 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 MMP1P03956 469 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 PDHBP11177 359 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 FGFR1P11362 822 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 PABPC1P11940 636 aaKnown RBP4.87□□□□□ -1.63
SPTA1-206ENST00000484520 AKR1B1P15121 316 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 VEGFAP15692 232 aaPredicted RBP4.87□□□□□ -1.63
SPTA1-206ENST00000484520 U2AF2P26368 475 aaKnown RBP eCLIP4.87□□□□□ -1.634e-7■■■■□ 22.1
SPTA1-206ENST00000484520 MC4RP32245 332 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 NF2P35240 595 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 KRT2P35908 639 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 MRE11P49959 708 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 ZNF543Q08ER8 600 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 RESTQ13127 1097 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 HNRNPA0Q13151 305 aaKnown RBP4.87□□□□□ -1.63
SPTA1-206ENST00000484520 RASA3Q14644 834 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 TRIM68Q6AZZ1 485 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 NSMFQ6X4W1 530 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 Q6ZPA2 131 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 ARHGAP36Q6ZRI8 547 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 OTOP2Q7RTS6 562 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 ADGRE4PQ86SQ3 457 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 FAM160B2Q86V87 743 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 NOSTRINQ8IVI9 506 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 ULK2Q8IYT8 1036 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 NLGN4XQ8N0W4 816 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 SLC44A5Q8NCS7 719 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 CHURC1Q8WUH1 139 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 SGSM3Q96HU1 749 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 PRRX2Q99811 253 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 PYM1Q9BRP8 204 aaKnown RBP4.87□□□□□ -1.63
SPTA1-206ENST00000484520 DEFB129Q9H1M3 183 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 OR10A2Q9H208 303 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 AS3MTQ9HBK9 375 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 ARHGEF4Q9NR80 690 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 BARHL2Q9NY43 387 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 RNF181Q9P0P0 153 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 PSME4Q14997 1843 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 FER1L6Q2WGJ9 1857 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 CNTNAP1P78357 1384 aa4.87□□□□□ -1.63
SPTA1-206ENST00000484520 COL4A5P29400 1685 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 GOLGB1Q14789 3259 aaKnown RBP4.86□□□□□ -1.63
SPTA1-206ENST00000484520 CLRN2A0PK11 232 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 KLRF2D3W0D1 207 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 LAD1O00515 517 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 PPP6R2O75170 966 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 FDPSP14324 419 aaKnown RBP4.86□□□□□ -1.63
SPTA1-206ENST00000484520 SLC1A4P43007 532 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 MEOX1P50221 254 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 KIF23Q02241 960 aaPredicted RBP4.86□□□□□ -1.63
SPTA1-206ENST00000484520 IFRD2Q12894 506 aaPredicted RBP4.86□□□□□ -1.63
SPTA1-206ENST00000484520 PKP1Q13835 747 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 RRP1BQ14684 758 aaKnown RBP4.86□□□□□ -1.63
SPTA1-206ENST00000484520 SF3A1Q15459 793 aaKnown RBP4.86□□□□□ -1.63
SPTA1-206ENST00000484520 STILQ15468 1287 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 GPR19Q15760 415 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 KRT40Q6A162 431 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 SAMD3Q8N6K7 520 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 SHCBP1Q8NEM2 672 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 PHKBQ93100 1093 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 DCPSQ96C86 337 aaKnown RBP4.86□□□□□ -1.63
SPTA1-206ENST00000484520 WNK4Q96J92 1243 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 MYL10Q9BUA6 226 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 RIOX1Q9H6W3 641 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 ZNF408Q9H9D4 720 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 AGO3Q9H9G7 860 aaKnown RBP4.86□□□□□ -1.63
SPTA1-206ENST00000484520 C6orf50Q9HD87 102 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 CLIP2Q9UDT6 1046 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 MAD2L2Q9UI95 211 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 HACL1Q9UJ83 578 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 HOOK1Q9UJC3 728 aaKnown RBP4.86□□□□□ -1.63
SPTA1-206ENST00000484520 ZBTB21Q9ULJ3 1066 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 TMX2Q9Y320 296 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 TRAF6Q9Y4K3 522 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 ATP23Q9Y6H3 246 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 DDX49Q9Y6V7 483 aaKnown RBP4.86□□□□□ -1.63
SPTA1-206ENST00000484520 ZNF541Q9H0D2 1346 aa4.86□□□□□ -1.63
SPTA1-206ENST00000484520 MYH2Q9UKX2 1941 aa4.85□□□□□ -1.63
SPTA1-206ENST00000484520 A0A0G2JNJ9 132 aa4.85□□□□□ -1.63
SPTA1-206ENST00000484520 CCDC194A0A1B0GVG4 234 aa4.85□□□□□ -1.63
SPTA1-206ENST00000484520 GLTPD2A6NH11 291 aa4.85□□□□□ -1.63
SPTA1-206ENST00000484520 C19orf81C9J6K1 198 aa4.85□□□□□ -1.63
SPTA1-206ENST00000484520 F5H6K3 240 aa4.85□□□□□ -1.63
SPTA1-206ENST00000484520 MAN2B1O00754 1011 aa4.85□□□□□ -1.63
SPTA1-206ENST00000484520 ZBTB5O15062 677 aa4.85□□□□□ -1.63
SPTA1-206ENST00000484520 WDR46O15213 610 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms