RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 A0A1B0GVG6 124 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 DENND3A2RUS2 1198 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 TLR3O15455 904 aaKnown RBP20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 RBM5P52756 815 aaKnown RBP eCLIP20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 RPL7AP62424 266 aaKnown RBP20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 AP1B1Q10567 949 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 FAM102BQ5T8I3 360 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 LMBRD2Q68DH5 695 aaPredicted RBP20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 CENPUQ71F23 418 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 VPS52Q8N1B4 723 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 IL31RAQ8NI17 732 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 ACSF2Q96CM8 615 aaPredicted RBP20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 IDI2Q9BXS1 227 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 SYNCQ9H7C4 482 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 GOLGB1Q14789 3259 aaKnown RBP20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 AMPD1P23109 780 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 YWHABP31946 246 aaKnown RBP20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 ARFIP2P53365 341 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 OASLQ15646 514 aaKnown RBP20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 FNBP1LQ5T0N5 605 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 ANKRD22Q5VYY1 191 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 TXNRD3NBQ6F5E7 133 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 SPOPLQ6IQ16 392 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 FBXL18Q96ME1 805 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 TMEM120AQ9BXJ8 343 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 TRIM55Q9BYV6 548 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 C10orf88Q9H8K7 445 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 IFNB1P01574 187 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 PSMC4P43686 418 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 QARSP47897 775 aaKnown RBP20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 PLA2G4FQ68DD2 849 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 PLEKHA7Q6IQ23 1121 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 DRICH1Q6PGQ1 229 aaPredicted RBP20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 ADGRD1Q6QNK2 874 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 MCUR1Q96AQ8 359 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 PAFAH2Q99487 392 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 DHRS4Q9BTZ2 278 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 TSSK1BQ9BXA7 367 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 VPS11Q9H270 941 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 ARHGEF4Q9NR80 690 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 IVNS1ABPQ9Y6Y0 642 aa20.79■□□□□ 0.92
RPUSD3-216ENST00000484134 DLDP09622 509 aaKnown RBP20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 NPTX2P47972 431 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 NOMO3P69849 1222 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 THOC5Q13769 683 aaKnown RBP20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 SEPT7Q16181 437 aaKnown RBP20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 ZFYVE27Q5T4F4 411 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 MAP4K3Q8IVH8 894 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 DDX50Q9BQ39 737 aaKnown RBP20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 ARMCX1Q9P291 453 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 NFASCO94856 1347 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 DNAJC6O75061 913 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 NEK3P51956 506 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 SOX10P56693 466 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 CDK16Q00536 496 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 LIN9Q5TKA1 542 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 RCOR2Q8IZ40 523 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 FBXO27Q8NI29 283 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 IWS1Q96ST2 819 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 COL20A1Q9P218 1284 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 SHOC2Q9UQ13 582 aa20.78■□□□□ 0.92
RPUSD3-216ENST00000484134 RARBP10826 455 aa20.77■□□□□ 0.92
RPUSD3-216ENST00000484134 VCPP55072 806 aaKnown RBP20.77■□□□□ 0.92
RPUSD3-216ENST00000484134 ZBTB16Q05516 673 aa20.77■□□□□ 0.92
RPUSD3-216ENST00000484134 C3orf62Q6ZUJ4 267 aa20.77■□□□□ 0.92
RPUSD3-216ENST00000484134 ENOSF1Q7L5Y1 443 aa20.77■□□□□ 0.92
RPUSD3-216ENST00000484134 ZNF677Q86XU0 584 aa20.77■□□□□ 0.92
RPUSD3-216ENST00000484134 DCAKDQ8WVC6 231 aa20.77■□□□□ 0.92
RPUSD3-216ENST00000484134 BSNDQ8WZ55 320 aa20.77■□□□□ 0.92
RPUSD3-216ENST00000484134 FGD4Q96M96 766 aa20.77■□□□□ 0.92
RPUSD3-216ENST00000484134 C1orf112Q9NSG2 853 aa20.77■□□□□ 0.92
RPUSD3-216ENST00000484134 PCMTD2Q9NV79 361 aa20.77■□□□□ 0.92
RPUSD3-216ENST00000484134 DRG1Q9Y295 367 aaKnown RBP20.77■□□□□ 0.92
RPUSD3-216ENST00000484134 ASTN2O75129 1339 aaPredicted RBP20.77■□□□□ 0.92
RPUSD3-216ENST00000484134 KRT1P04264 644 aa20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 GTF2H1P32780 548 aa20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 CPA2P48052 419 aa20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 ERFP50548 548 aa20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 ZNF252P-AS1Q0IIN9 211 aa20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 HIF1AQ16665 826 aa20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 ZC3H12AQ5D1E8 599 aaKnown RBP20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 TRAPPC9Q96Q05 1148 aa20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 TUBB6Q9BUF5 446 aa20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 TRIM4Q9C037 500 aa20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 DBNDD1Q9H9R9 158 aa20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 PPCSQ9HAB8 311 aa20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 SAE1Q9UBE0 346 aaPredicted RBP20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 FARP1Q9Y4F1 1045 aaPredicted RBP20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.77■□□□□ 0.91
RPUSD3-216ENST00000484134 LRRC37AA6NMS7 1700 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 MYH9P35579 1960 aaKnown RBP20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 GSTA2P09210 222 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 UBTFL6P0CB48 400 aaPredicted RBP20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 ESRRAP11474 423 aaPredicted RBP20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 ACO1P21399 889 aaKnown RBP20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 ARL4CP56559 192 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 WNT7BP56706 349 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 C15orf39Q6ZRI6 1047 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 TAB3Q8N5C8 712 aaPredicted RBP20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 PYROXD1Q8WU10 500 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms