RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CYP3A5P20815 502 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 HOXD10P28358 340 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 ECHS1P30084 290 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 AFF1P51825 1210 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 NDST1P52848 882 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 CRYBB1P53674 252 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 TAS2R40P59535 323 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 TNNC1P63316 161 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 RBP5P82980 135 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 PTPN11Q06124 597 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 SOX4Q06945 474 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 CCDC70Q6NSX1 233 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 FAM228AQ86W67 206 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 PRELID2Q8N945 189 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 TMEM35BQ8NCS4 154 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 SMG8Q8ND04 991 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 IFT81Q8WYA0 676 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 TMEM176AQ96HP8 235 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 PLEKHA5Q9HAU0 1116 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 GOLGA2P5Q9HBQ8 144 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 CNTN3Q9P232 1028 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 SRRDQ9UH36 339 aa9.38□□□□□ -0.91
CDC42SE1-204ENST00000483763 SCN10AQ9Y5Y9 1956 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 SMIM28A0A1B0GU29 152 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 CCDC66A2RUB6 948 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 TMEM191CA6NGB0 347 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 PROSCO94903 275 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 LSM8O95777 96 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 CHRNA1P02708 482 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 CTSHP09668 335 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 PRKAR2AP13861 404 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 CTNNA2P26232 953 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 SMC1AQ14683 1233 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 SIX1Q15475 284 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 ATP13A4Q4VNC1 1196 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 DPH6Q7L8W6 267 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 RAET1EQ8TD07 263 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 C18orf8Q96DM3 657 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 TRIM11Q96F44 468 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 DDX27Q96GQ7 796 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 ZFP42Q96MM3 310 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 CPXM1Q96SM3 734 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 LPIN3Q9BQK8 851 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 MRPL45Q9BRJ2 306 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 MTG1Q9BT17 334 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 CACNG4Q9UBN1 327 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 IPPQ9Y573 584 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 SNX9Q9Y5X1 595 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 CEP290O15078 2479 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 SZT2Q5T011 3432 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 BHMG1C9JSJ3 638 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 F8VP50 259 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 CCDC188H7C350 402 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 SPTLC1O15269 473 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 ASGR1P07306 291 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 PAEPP09466 180 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 RARBP10826 455 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 MCM3P25205 808 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 TNNT3P45378 269 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 INCA1Q0VD86 236 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 PCBP1Q15365 356 aaKnown RBP eCLIP9.37□□□□□ -0.914e-8■■■□□ 14.6
CDC42SE1-204ENST00000483763 KCNA10Q16322 511 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 FAM47CQ5HY64 1035 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 PPP1R15BQ5SWA1 713 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 LIN9Q5TKA1 542 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 CCSAPQ6IQ19 270 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 TTC27Q6P3X3 843 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 NT5DC4Q86YG4 428 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 CD302Q8IX05 232 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 NME8Q8N427 588 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 UBA3Q8TBC4 463 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 FEZF2Q8TBJ5 459 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 HEXIM2Q96MH2 286 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 MCEEQ96PE7 176 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 CFHR5Q9BXR6 569 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 UPF3AQ9H1J1 476 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 SPC25Q9HBM1 224 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 XPNPEP3Q9NQH7 507 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 PARVAQ9NVD7 372 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 CDY2AQ9Y6F7 541 aa9.37□□□□□ -0.91
CDC42SE1-204ENST00000483763 LAMA3Q16787 3333 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 MICAL2O94851 1124 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 ERBB2P04626 1255 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 RARAP10276 462 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 GNAT1P11488 350 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 EN2P19622 333 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 GPD2P43304 727 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 YARSP54577 528 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 RWDD2BP57060 319 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 SOWAHAQ2M3V2 549 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 ZNF618Q5T7W0 954 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 C9orf57Q5W0N0 161 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 TXNRD3NBQ6F5E7 133 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 TAF2Q6P1X5 1199 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 SND1Q7KZF4 910 aaKnown RBP eCLIP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 ERICH1Q86X53 443 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 SLC13A5Q86YT5 568 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 IFT20Q8IY31 132 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 TSEN2Q8NCE0 465 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 FAXDC2Q96IV6 333 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms