RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
SND1-210ENST00000483503 DAPK3O43293 454 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 RNF40O75150 1001 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 ECEL1O95672 775 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 RARAP10276 462 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 HOXC8P31273 242 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 PNPLA4P41247 253 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 PTGIRP43119 386 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 SSR1P43307 286 aaKnown RBP12.62□□□□□ -0.39
SND1-210ENST00000483503 RAP1GAPP47736 663 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 GUCY2FP51841 1108 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 GJA9P57773 515 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 LMNB2Q03252 620 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 CRHR2Q13324 411 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 ACAP1Q15027 740 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 SNX17Q15036 470 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 PPP1R15BQ5SWA1 713 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 SCARA3Q6AZY7 606 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 DENND1BQ6P3S1 775 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 PHLDB2Q86SQ0 1253 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 IPO4Q8TEX9 1081 aaKnown RBP12.62□□□□□ -0.39
SND1-210ENST00000483503 FNIP1Q8TF40 1166 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 HEXIM2Q96MH2 286 aaKnown RBP12.62□□□□□ -0.39
SND1-210ENST00000483503 ZNF560Q96MR9 790 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 SH3GL2Q99962 352 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 CELF4Q9BZC1 486 aaKnown RBP12.62□□□□□ -0.39
SND1-210ENST00000483503 ELOVL4Q9GZR5 314 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 SDCBP2Q9H190 292 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 ERVK-5Q9HDB9 667 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 ST7Q9NRC1 585 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 SNTG2Q9NY99 539 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 MTRF1LQ9UGC7 380 aaKnown RBP12.62□□□□□ -0.39
SND1-210ENST00000483503 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.62□□□□□ -0.39
SND1-210ENST00000483503 FAN1Q9Y2M0 1017 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 DOCK3Q8IZD9 2030 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 GOLGA6L10A6NI86 522 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 FAM155AB1AL88 458 aaPredicted RBP12.61□□□□□ -0.39
SND1-210ENST00000483503 TREHO43280 583 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 SYF2O95926 243 aaKnown RBP12.61□□□□□ -0.39
SND1-210ENST00000483503 GAS8O95995 478 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 FAM153BP0C7A2 387 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 SETSIPP0DME0 302 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 CYP3A5P20815 502 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 FGFR4P22455 802 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 SSTR3P32745 418 aaPredicted RBP12.61□□□□□ -0.39
SND1-210ENST00000483503 PTPN7P35236 360 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 GABRB2P47870 512 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 CDH8P55286 799 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 PSMC1P62191 440 aaKnown RBP12.61□□□□□ -0.39
SND1-210ENST00000483503 PURAQ00577 322 aaKnown RBP12.61□□□□□ -0.39
SND1-210ENST00000483503 BEX3Q00994 111 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 TMEM62Q0P6H9 643 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 ZBTB6Q15916 424 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 HADHQ16836 314 aaKnown RBP12.61□□□□□ -0.39
SND1-210ENST00000483503 FAM153CQ494X1 144 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 AADACL2Q6P093 401 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 LCLAT1Q6UWP7 414 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 ALKAL1Q6UXT8 129 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 POLNQ7Z5Q5 900 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 UNC93AQ86WB7 457 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 CCDC50Q8IVM0 306 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 HACE1Q8IYU2 909 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 IQCKQ8N0W5 287 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 WDTC1Q8N5D0 677 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 TSEN2Q8NCE0 465 aaKnown RBP12.61□□□□□ -0.39
SND1-210ENST00000483503 MCEEQ96PE7 176 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 FMO2Q99518 471 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 TRIM7Q9C029 511 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 TSPYL1Q9H0U9 437 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 UPF3AQ9H1J1 476 aaKnown RBP12.61□□□□□ -0.39
SND1-210ENST00000483503 DPH5Q9H2P9 285 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 PLEKHA4Q9H4M7 779 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 FAM153AQ9UHL3 310 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 ADAM21Q9UKJ8 722 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 PIN4Q9Y237 131 aaKnown RBP12.61□□□□□ -0.39
SND1-210ENST00000483503 USTQ9Y2C2 406 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 NR2E1Q9Y466 385 aa12.61□□□□□ -0.39
SND1-210ENST00000483503 A6NNZ2 444 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 M0QYV0 167 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 AGPSO00116 658 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 O00370 1275 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 NDC80O14777 642 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 MICAL2O94851 1124 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 KRT7P08729 469 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 FAM163BP0C2L3 166 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 KRT3P12035 628 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 KCNE1P15382 129 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 DESP17661 470 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 ECHS1P30084 290 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 NDST1P52848 882 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 NKX3-2P78367 333 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 CAV1Q03135 178 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 PPP1R7Q15435 360 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 SIX1Q15475 284 aaPredicted RBP12.6□□□□□ -0.39
SND1-210ENST00000483503 CCNG2Q16589 344 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 TUBB8Q3ZCM7 444 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 PTPN20Q4JDL3 420 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 C2CD6Q53TS8 623 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 CPNE8Q86YQ8 564 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 REM2Q8IYK8 340 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms