RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 ZP2Q05996 745 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 PPP3CAQ08209 521 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 SGSM1Q2NKQ1 1148 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 SLC39A12Q504Y0 691 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 SCARA5Q6ZMJ2 495 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 FILIP1Q7Z7B0 1213 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 TCEAL8Q8IYN2 117 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 DCP1BQ8IZD4 617 aaKnown RBP9.4□□□□□ -0.9
SNX4-205ENST00000482965 CCDC150Q8NCX0 1101 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 ZNF707Q96C28 371 aaPredicted RBP9.4□□□□□ -0.9
SNX4-205ENST00000482965 RPGRIP1Q96KN7 1286 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 RHOBTB2Q9BYZ6 727 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 IMPG2Q9BZV3 1241 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 ZCWPW1Q9H0M4 648 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 XYLT2Q9H1B5 865 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 SNX25Q9H3E2 840 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 VRTNQ9H8Y1 702 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 METTL14Q9HCE5 456 aaKnown RBP9.4□□□□□ -0.9
SNX4-205ENST00000482965 TMEM8AQ9HCN3 771 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 DACH1Q9UI36 760 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 RWDD2AQ9UIY3 292 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 NR2E1Q9Y466 385 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 INSL5Q9Y5Q6 135 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 MYH10P35580 1976 aa9.4□□□□□ -0.9
SNX4-205ENST00000482965 NOTCH4Q99466 2003 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 CLUHO75153 1309 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 GABRDO14764 452 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 PAPLNO95428 1278 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 VNN2O95498 520 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 GNA14O95837 355 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 POU2F2P09086 479 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 WARSP23381 471 aaKnown RBP9.39□□□□□ -0.91
SNX4-205ENST00000482965 CDR1P51861 262 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 TWF1Q12792 350 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 SMARCB1Q12824 385 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 DUSP4Q13115 394 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 PLD1Q13393 1074 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 NFE2Q16621 373 aaPredicted RBP9.39□□□□□ -0.91
SNX4-205ENST00000482965 TPD52L1Q16890 204 aaPredicted RBP9.39□□□□□ -0.91
SNX4-205ENST00000482965 DPCR1Q3MIW9 517 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 INTS6LQ5JSJ4 861 aaKnown RBP9.39□□□□□ -0.91
SNX4-205ENST00000482965 CCDC183Q5T5S1 534 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 KRT39Q6A163 491 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 LIMS2Q7Z4I7 341 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 GRASPQ7Z6J2 395 aaPredicted RBP9.39□□□□□ -0.91
SNX4-205ENST00000482965 FRMD5Q7Z6J6 570 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 GJD3Q8N144 294 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 ELMOD1Q8N336 334 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 ATAD1Q8NBU5 361 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 OR6B3Q8NGW1 331 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 TAS1R2Q8TE23 839 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 KBTBD7Q8WVZ9 684 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 TAF4BQ92750 862 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 ELMO3Q96BJ8 720 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 SYT15Q9BQS2 421 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 ACBD6Q9BR61 282 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 MRPL45Q9BRJ2 306 aaKnown RBP9.39□□□□□ -0.91
SNX4-205ENST00000482965 SRRTQ9BXP5 876 aaKnown RBP9.39□□□□□ -0.91
SNX4-205ENST00000482965 SMYD3Q9H7B4 428 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 WDR6Q9NNW5 1121 aaKnown RBP9.39□□□□□ -0.91
SNX4-205ENST00000482965 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNX4-205ENST00000482965 ABI2Q9NYB9 513 aaPredicted RBP9.39□□□□□ -0.91
SNX4-205ENST00000482965 YIPF1Q9Y548 306 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 PTPRDP23468 1912 aa9.39□□□□□ -0.91
SNX4-205ENST00000482965 LOC730098B7Z3J9 87 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 DLL1O00548 723 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 HCRTO43612 131 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 TACC1O75410 805 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 ASS1P00966 412 aaKnown RBP9.38□□□□□ -0.91
SNX4-205ENST00000482965 PDGFRBP09619 1106 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 FAM163BP0C2L3 166 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 CCDC192P0DO97 292 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 GNL1P36915 607 aaPredicted RBP9.38□□□□□ -0.91
SNX4-205ENST00000482965 RAP1GAPP47736 663 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 ALDH1A3P47895 512 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 PSEN1P49768 467 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 MCCD1P59942 119 aaPredicted RBP9.38□□□□□ -0.91
SNX4-205ENST00000482965 PSMC1P62191 440 aaKnown RBP9.38□□□□□ -0.91
SNX4-205ENST00000482965 NOP14P78316 857 aaKnown RBP9.38□□□□□ -0.91
SNX4-205ENST00000482965 NTHL1P78549 312 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 MGAT5BQ3V5L5 792 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 SPOPLQ6IQ16 392 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 SASS6Q6UVJ0 657 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 GET4Q7L5D6 327 aaPredicted RBP9.38□□□□□ -0.91
SNX4-205ENST00000482965 OTOP3Q7RTS5 596 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 LRRTM3Q86VH5 581 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 TTC9BQ8N6N2 239 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 TDRD5Q8NAT2 981 aaKnown RBP9.38□□□□□ -0.91
SNX4-205ENST00000482965 FBXL13Q8NEE6 735 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 SPPL2BQ8TCT7 592 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 C2orf15Q8WU43 125 aaKnown RBP9.38□□□□□ -0.91
SNX4-205ENST00000482965 SLC35C1Q96A29 364 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 ACSF2Q96CM8 615 aaPredicted RBP9.38□□□□□ -0.91
SNX4-205ENST00000482965 SEPT5Q99719 369 aaPredicted RBP9.38□□□□□ -0.91
SNX4-205ENST00000482965 PI4K2AQ9BTU6 479 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 CRISPLD1Q9H336 500 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 TMLHEQ9NVH6 421 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 HCFC1R1Q9NWW0 138 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 GTF3C4Q9UKN8 822 aa9.38□□□□□ -0.91
SNX4-205ENST00000482965 CDH9Q9ULB4 789 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms