RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 RASSF3Q86WH2 238 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 ERC1Q8IUD2 1116 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 MIGA1Q8NAN2 632 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 BTN2A2Q8WVV5 523 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 DIO2Q92813 273 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 ZSWIM3Q96MP5 696 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 P2RX7Q99572 595 aaKnown RBP7.47□□□□□ -1.21
CLK1-212ENST00000482590 DHRS4Q9BTZ2 278 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 MRPL4Q9BYD3 311 aaKnown RBP7.47□□□□□ -1.21
CLK1-212ENST00000482590 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.47□□□□□ -1.21
CLK1-212ENST00000482590 C11orf49Q9H6J7 331 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 RETREG1Q9H6L5 497 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 CD248Q9HCU0 757 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 CABP5Q9NP86 173 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 MAN1C1Q9NR34 630 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 SERPINB13Q9UIV8 391 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 FBXL7Q9UJT9 491 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 MCM3APO60318 1980 aa7.46□□□□□ -1.21
CLK1-212ENST00000482590 SMCHD1A6NHR9 2005 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 ABHD14A-ACY1A0A1B0GW23 586 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 A0A1W2PRQ8 180 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 hCG_1984214I3L0E3 225 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 GPR42O15529 346 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 TBX1O43435 398 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 GH2P01242 217 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 MLLT6P55198 1093 aaPredicted RBP7.46□□□□□ -1.22
CLK1-212ENST00000482590 TBX2Q13207 712 aaPredicted RBP7.46□□□□□ -1.22
CLK1-212ENST00000482590 PDE1CQ14123 709 aaPredicted RBP7.46□□□□□ -1.22
CLK1-212ENST00000482590 GALEQ14376 348 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 ELF2Q15723 593 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 SHROOM1Q2M3G4 852 aaPredicted RBP7.46□□□□□ -1.22
CLK1-212ENST00000482590 SLC10A6Q3KNW5 377 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 CEP85Q6P2H3 762 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 C16orf54Q6UWD8 224 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 GPR142Q7Z601 462 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 PLEKHH3Q7Z736 793 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 AACSQ86V21 672 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 ARRDC4Q8NCT1 418 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 EAF2Q96CJ1 260 aaPredicted RBP7.46□□□□□ -1.22
CLK1-212ENST00000482590 TMEM169Q96HH4 297 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 TBATAQ96M53 351 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 PRO3102Q9H379 93 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 TXNRD2Q9NNW7 524 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 GJD2Q9UKL4 321 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 ZMYND8Q9ULU4 1186 aaPredicted RBP7.46□□□□□ -1.22
CLK1-212ENST00000482590 FAM50BQ9Y247 325 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 EXOC6BQ9Y2D4 811 aa7.46□□□□□ -1.22
CLK1-212ENST00000482590 NPEPPSL1A6NEC2 478 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 PMM2O15305 246 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 SNX2O60749 519 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 RPN1P04843 607 aaKnown RBP7.45□□□□□ -1.22
CLK1-212ENST00000482590 SETSIPP0DME0 302 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 VCAM1P19320 739 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 TNFAIP3P21580 790 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 GTF2H3Q13889 308 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 NCAPHQ15003 741 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 ABCB5Q2M3G0 1257 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 CERKLQ49MI3 558 aaPredicted RBP7.45□□□□□ -1.22
CLK1-212ENST00000482590 MAP3K21Q5TCX8 1036 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 PKN3Q6P5Z2 889 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 CRIP3Q6Q6R5 217 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 ZSCAN30Q86W11 494 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 DNERQ8NFT8 737 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 IGDCC4Q8TDY8 1250 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 PGBD4Q96DM1 585 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 CLIP3Q96DZ5 547 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 TOE1Q96GM8 510 aaKnown RBP7.45□□□□□ -1.22
CLK1-212ENST00000482590 CDK5RAP3Q96JB5 506 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 TNIP3Q96KP6 325 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 C12orf42Q96LP6 360 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 CRNKL1Q9BZJ0 848 aaKnown RBP7.45□□□□□ -1.22
CLK1-212ENST00000482590 KLC2Q9H0B6 622 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 TMEM168Q9H0V1 697 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 PORCNQ9H237 461 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 L2HGDHQ9H9P8 463 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 DTLQ9NZJ0 730 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 STAP2Q9UGK3 403 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 OGDHLQ9ULD0 1010 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 DMTF1Q9Y222 760 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 ANKRD6Q9Y2G4 727 aa7.45□□□□□ -1.22
CLK1-212ENST00000482590 FRMPD2Q68DX3 1309 aaPredicted RBP7.45□□□□□ -1.22
CLK1-212ENST00000482590 DNAH12Q6ZR08 3092 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 MPHOSPH10O00566 681 aaKnown RBP7.44□□□□□ -1.22
CLK1-212ENST00000482590 HGSO14964 777 aaPredicted RBP7.44□□□□□ -1.22
CLK1-212ENST00000482590 HMMRO75330 724 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 SLPIP03973 132 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 CCND3P30281 292 aaPredicted RBP7.44□□□□□ -1.22
CLK1-212ENST00000482590 CYP2C19P33261 490 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 FAM193AP78312 1265 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 PCBP1Q15365 356 aaKnown RBP eCLIP7.44□□□□□ -1.22
CLK1-212ENST00000482590 PTPN21Q16825 1174 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 MZT2BQ6NZ67 158 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 TATDN1Q6P1N9 297 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 EPM2AIP1Q7L775 607 aaPredicted RBP7.44□□□□□ -1.22
CLK1-212ENST00000482590 MAATS1Q7Z4T9 603 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 FAM186BQ8IYM0 893 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 KREMEN2Q8NCW0 462 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 RCBTB1Q8NDN9 531 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 CLIC6Q96NY7 704 aa7.44□□□□□ -1.22
CLK1-212ENST00000482590 TSPAN18Q96SJ8 248 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms