RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 PTPN2P17706 415 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 PIK3CAP42336 1068 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 GCLMP48507 274 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 PPP3CAQ08209 521 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 DUSP4Q13115 394 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 SLC39A12Q504Y0 691 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 INTS6LQ5JSJ4 861 aaKnown RBP17.49■□□□□ 0.39
CCDC78-212ENST00000482152 IQCEQ6IPM2 695 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 ZDHHC14Q8IZN3 488 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 GPT2Q8TD30 523 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 EEF2KMTQ96G04 330 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 RPGRIP1Q96KN7 1286 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 ZNF512Q96ME7 567 aaPredicted RBP17.49■□□□□ 0.39
CCDC78-212ENST00000482152 FAM124BQ9H5Z6 455 aaPredicted RBP17.49■□□□□ 0.39
CCDC78-212ENST00000482152 NXF1Q9UBU9 619 aaKnown RBP17.49■□□□□ 0.39
CCDC78-212ENST00000482152 CTNND2Q9UQB3 1225 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 PCDHB5Q9Y5E4 795 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 PLXNA3P51805 1871 aa17.49■□□□□ 0.39
CCDC78-212ENST00000482152 CLUHO75153 1309 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 ZNF197O14709 1029 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 CCL16O15467 120 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 MICAL2O94851 1124 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 ASS1P00966 412 aaKnown RBP17.48■□□□□ 0.39
CCDC78-212ENST00000482152 HLA-DRAP01903 254 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 OR4Q2P0C623 313 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 TRIM49P0CI25 452 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 TRIM49CP0CI26 452 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 ERCC5P28715 1186 aaPredicted RBP17.48■□□□□ 0.39
CCDC78-212ENST00000482152 EPHB3P54753 998 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 MARSP56192 900 aaKnown RBP17.48■□□□□ 0.39
CCDC78-212ENST00000482152 NLRP12P59046 1061 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 CCDC40Q4G0X9 1142 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 FAM171BQ6P995 826 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 LRRTM3Q86VH5 581 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 TDRD5Q8NAT2 981 aaKnown RBP17.48■□□□□ 0.39
CCDC78-212ENST00000482152 ATAD1Q8NBU5 361 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 FBXL13Q8NEE6 735 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 KBTBD7Q8WVZ9 684 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 FUBP3Q96I24 572 aaKnown RBP eCLIP17.48■□□□□ 0.39
CCDC78-212ENST00000482152 NECAB3Q96P71 396 aaPredicted RBP17.48■□□□□ 0.39
CCDC78-212ENST00000482152 PGLYRP2Q96PD5 576 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 TMEM209Q96SK2 561 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 DNAI2Q9GZS0 605 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 POLIQ9UNA4 740 aa17.48■□□□□ 0.39
CCDC78-212ENST00000482152 N4BP1O75113 896 aaKnown RBP17.47■□□□□ 0.39
CCDC78-212ENST00000482152 CCDC192P0DO97 292 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 TRIM21P19474 475 aaKnown RBP17.47■□□□□ 0.39
CCDC78-212ENST00000482152 PTMSP20962 102 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 FSHRP23945 695 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 MXI1P50539 228 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 TWF1Q12792 350 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 CETN1Q12798 172 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 WDR44Q5JSH3 913 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 TCERG1LQ5VWI1 586 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 C4orf50Q6ZRC1 276 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 RBM43Q6ZSC3 357 aaKnown RBP17.47■□□□□ 0.39
CCDC78-212ENST00000482152 GRASPQ7Z6J2 395 aaPredicted RBP17.47■□□□□ 0.39
CCDC78-212ENST00000482152 ITIH5Q86UX2 942 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 TTC39CQ8N584 583 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 OR6B3Q8NGW1 331 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 NXPE3Q969Y0 559 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 CEP295NLQ96MC4 621 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 SRRTQ9BXP5 876 aaKnown RBP17.47■□□□□ 0.39
CCDC78-212ENST00000482152 CYP3A43Q9HB55 503 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 RAB20Q9NX57 234 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 COQ4Q9Y3A0 265 aa17.47■□□□□ 0.39
CCDC78-212ENST00000482152 P4HA2O15460 535 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 VNN2O95498 520 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 FGF19O95750 216 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 HAPLN1P10915 354 aaPredicted RBP17.46■□□□□ 0.39
CCDC78-212ENST00000482152 ALADP13716 330 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 PRKCSHP14314 528 aaPredicted RBP17.46■□□□□ 0.39
CCDC78-212ENST00000482152 STX17P56962 302 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 CFAP221Q4G0U5 840 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 PABPC1LQ4VXU2 614 aaKnown RBP17.46■□□□□ 0.39
CCDC78-212ENST00000482152 DCAF17Q5H9S7 520 aaPredicted RBP17.46■□□□□ 0.39
CCDC78-212ENST00000482152 CYP4A22Q5TCH4 519 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 UNC93AQ86WB7 457 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 OSTM1Q86WC4 334 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 SLC35C1Q96A29 364 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 TNIP3Q96KP6 325 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 PKMYT1Q99640 499 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 SYT15Q9BQS2 421 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 DNMT3BQ9UBC3 853 aaKnown RBP17.46■□□□□ 0.39
CCDC78-212ENST00000482152 CDH22Q9UJ99 828 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 GTF3C4Q9UKN8 822 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 YIPF1Q9Y548 306 aa17.46■□□□□ 0.39
CCDC78-212ENST00000482152 A8MXQ7 604 aa17.45■□□□□ 0.38
CCDC78-212ENST00000482152 CLSTN1O94985 981 aa17.45■□□□□ 0.38
CCDC78-212ENST00000482152 RHOP08100 348 aa17.45■□□□□ 0.38
CCDC78-212ENST00000482152 LMO2P25791 158 aa17.45■□□□□ 0.38
CCDC78-212ENST00000482152 MAGEA11P43364 429 aa17.45■□□□□ 0.38
CCDC78-212ENST00000482152 RPL10AP62906 217 aaKnown RBP17.45■□□□□ 0.38
CCDC78-212ENST00000482152 VEPH1Q14D04 833 aa17.45■□□□□ 0.38
CCDC78-212ENST00000482152 MGAT5BQ3V5L5 792 aa17.45■□□□□ 0.38
CCDC78-212ENST00000482152 CCDC183Q5T5S1 534 aa17.45■□□□□ 0.38
CCDC78-212ENST00000482152 RNF135Q8IUD6 432 aa17.45■□□□□ 0.38
CCDC78-212ENST00000482152 SPATA2LQ8IUW3 424 aaPredicted RBP17.45■□□□□ 0.38
CCDC78-212ENST00000482152 MYCBPAPQ8TBZ2 947 aa17.45■□□□□ 0.38
CCDC78-212ENST00000482152 TAS1R2Q8TE23 839 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms