RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 ZNF334Q9HCZ1 680 aaPredicted RBP5.76□□□□□ -1.49
CAPN9-204ENST00000480004 TMEM9BQ9NQ34 198 aa5.76□□□□□ -1.49
CAPN9-204ENST00000480004 KRT82Q9NSB4 513 aa5.76□□□□□ -1.49
CAPN9-204ENST00000480004 TBC1D22BQ9NU19 505 aa5.76□□□□□ -1.49
CAPN9-204ENST00000480004 FBXW11Q9UKB1 542 aa5.76□□□□□ -1.49
CAPN9-204ENST00000480004 PRG3Q9Y2Y8 225 aaPredicted RBP5.76□□□□□ -1.49
CAPN9-204ENST00000480004 PCDHA10Q9Y5I2 948 aa5.76□□□□□ -1.49
CAPN9-204ENST00000480004 PIAS3Q9Y6X2 628 aa5.76□□□□□ -1.49
CAPN9-204ENST00000480004 FAM221BA6H8Z2 402 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 SHISA7A6NL88 538 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 DDX39AO00148 427 aaKnown RBP5.75□□□□□ -1.49
CAPN9-204ENST00000480004 ZNF197O14709 1029 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 IFIT3O14879 490 aaKnown RBP5.75□□□□□ -1.49
CAPN9-204ENST00000480004 ZNF263O14978 683 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 CCL16O15467 120 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 ATG13O75143 517 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 TADA2AO75478 443 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 CAVIN2O95810 425 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 EFEMP2O95967 443 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 CCNE2O96020 404 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 POMCP01189 267 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 PSMC3P17980 439 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 FGFR4P22455 802 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 CCNE1P24864 410 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 NTHL1P78549 312 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 RPL6Q02878 288 aaKnown RBP5.75□□□□□ -1.49
CAPN9-204ENST00000480004 GSTM4Q03013 218 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 TROAPQ12815 778 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 NMIQ13287 307 aaPredicted RBP5.75□□□□□ -1.49
CAPN9-204ENST00000480004 ITGB3BPQ13352 177 aaPredicted RBP5.75□□□□□ -1.49
CAPN9-204ENST00000480004 CCDC6Q16204 474 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 SLC35G1Q2M3R5 365 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 COL28A1Q2UY09 1125 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 SEZ6Q53EL9 994 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 HGSNATQ68CP4 663 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 TANGO2Q6ICL3 276 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 FUT10Q6P4F1 479 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 C19orf48Q6RUI8 117 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 TRMT1LQ7Z2T5 733 aaKnown RBP5.75□□□□□ -1.49
CAPN9-204ENST00000480004 REC114Q7Z4M0 266 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 ZNF589Q86UQ0 364 aaPredicted RBP5.75□□□□□ -1.49
CAPN9-204ENST00000480004 MAP4K3Q8IVH8 894 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 HACE1Q8IYU2 909 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 LRRC71Q8N4P6 559 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 GALNT6Q8NCL4 622 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 FBXO27Q8NI29 283 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 E2F7Q96AV8 911 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 MCRS1Q96EZ8 462 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 BTBD6Q96KE9 485 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 PLA2G2FQ9BZM2 168 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 MARCH5Q9NX47 278 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 GABBR1Q9UBS5 961 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 FRYLO94915 3013 aa5.75□□□□□ -1.49
CAPN9-204ENST00000480004 A0A087WZ62 844 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 MEIS3P2A8K0S8 358 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 LINC01387J3KSC0 135 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 IPO5O00410 1097 aaKnown RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 HYAL3O43820 417 aaPredicted RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 B4GALT3O60512 393 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 CSDE1O75534 798 aaKnown RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 BPNT1O95861 308 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 TOP3BO95985 862 aaKnown RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 ITGA4P13612 1032 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 PTPN2P17706 415 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 NCLP19338 710 aaKnown RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 GDI1P31150 447 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 KPNA1P52294 538 aaPredicted RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 CREB5Q02930 508 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 DSC1Q08554 894 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 NCBP1Q09161 790 aaKnown RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 ELAVL2Q12926 359 aaKnown RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 HNRNPDQ14103 355 aaKnown RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 KARSQ15046 597 aaKnown RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 TXNDC11Q6PKC3 985 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 NOP9Q86U38 636 aaKnown RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 KBTBD6Q86V97 674 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 C11orf74Q86VG3 221 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 CAMKK1Q8N5S9 505 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 SLC7A14Q8TBB6 771 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 SLC7A3Q8WY07 619 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 ZNF668Q96K58 619 aaPredicted RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 JPH2Q9BR39 696 aaPredicted RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 FDXACB1Q9BRP7 624 aaPredicted RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 TTPALQ9BTX7 342 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 DSCC1Q9BVC3 393 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 SRRTQ9BXP5 876 aaKnown RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 GPR88Q9GZN0 384 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 GLT8D2Q9H1C3 349 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 AGPAT5Q9NUQ2 364 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 DNMT3BQ9UBC3 853 aaKnown RBP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 ADAM28Q9UKQ2 775 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 SLC8A2Q9UPR5 921 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 COL4A3Q01955 1670 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 ZFYVE26Q68DK2 2539 aa5.74□□□□□ -1.49
CAPN9-204ENST00000480004 SF3B1O75533 1304 aaKnown RBP eCLIP5.74□□□□□ -1.49
CAPN9-204ENST00000480004 BAZ2BQ9UIF8 2168 aaKnown RBP5.73□□□□□ -1.49
CAPN9-204ENST00000480004 MYH9P35579 1960 aaKnown RBP5.73□□□□□ -1.49
CAPN9-204ENST00000480004 BCLAF3A2AJT9 711 aaKnown RBP5.73□□□□□ -1.49
CAPN9-204ENST00000480004 CAPN8A6NHC0 703 aa5.73□□□□□ -1.49
CAPN9-204ENST00000480004 WDR64B1ANS9 1081 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms