RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 SNX25Q9H3E2 840 aa20.21■□□□□ 0.83
AGRN-208ENST00000479707 METTL14Q9HCE5 456 aaKnown RBP20.21■□□□□ 0.83
AGRN-208ENST00000479707 CD320Q9NPF0 282 aa20.21■□□□□ 0.83
AGRN-208ENST00000479707 TMLHEQ9NVH6 421 aa20.21■□□□□ 0.83
AGRN-208ENST00000479707 PRKAG3Q9UGI9 489 aa20.21■□□□□ 0.83
AGRN-208ENST00000479707 INSL5Q9Y5Q6 135 aa20.21■□□□□ 0.83
AGRN-208ENST00000479707 STX10O60499 249 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 ATP2C2O75185 946 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 XYLBO75191 536 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 SOAT2O75908 522 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 WARSP23381 471 aaKnown RBP20.2■□□□□ 0.82
AGRN-208ENST00000479707 GTF2H1P32780 548 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 GNL1P36915 607 aaPredicted RBP20.2■□□□□ 0.82
AGRN-208ENST00000479707 MXI1P50539 228 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 MCCD1P59942 119 aaPredicted RBP20.2■□□□□ 0.82
AGRN-208ENST00000479707 NTHL1P78549 312 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 TWF1Q12792 350 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 CCDC142Q17RM4 750 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 FOXR2Q6PJQ5 311 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 TTC9BQ8N6N2 239 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 SMYD3Q9H7B4 428 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 VRTNQ9H8Y1 702 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 HCFC1R1Q9NWW0 138 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 ABI2Q9NYB9 513 aaPredicted RBP20.2■□□□□ 0.82
AGRN-208ENST00000479707 GTF3C4Q9UKN8 822 aa20.2■□□□□ 0.82
AGRN-208ENST00000479707 HOXA9P31269 272 aa20.19■□□□□ 0.82
AGRN-208ENST00000479707 PSMC1P62191 440 aaKnown RBP20.19■□□□□ 0.82
AGRN-208ENST00000479707 TPD52L1Q16890 204 aaPredicted RBP20.19■□□□□ 0.82
AGRN-208ENST00000479707 CBWD6Q4V339 395 aa20.19■□□□□ 0.82
AGRN-208ENST00000479707 INTS6LQ5JSJ4 861 aaKnown RBP20.19■□□□□ 0.82
AGRN-208ENST00000479707 CBWD3Q5JTY5 395 aa20.19■□□□□ 0.82
AGRN-208ENST00000479707 CBWD5Q5RIA9 395 aa20.19■□□□□ 0.82
AGRN-208ENST00000479707 CCDC183Q5T5S1 534 aa20.19■□□□□ 0.82
AGRN-208ENST00000479707 CYP26C1Q6V0L0 522 aa20.19■□□□□ 0.82
AGRN-208ENST00000479707 GJD3Q8N144 294 aa20.19■□□□□ 0.82
AGRN-208ENST00000479707 SPATA18Q8TC71 538 aa20.19■□□□□ 0.82
AGRN-208ENST00000479707 SEMA4DQ92854 862 aa20.19■□□□□ 0.82
AGRN-208ENST00000479707 SLC35C1Q96A29 364 aa20.19■□□□□ 0.82
AGRN-208ENST00000479707 IMPG2Q9BZV3 1241 aa20.19■□□□□ 0.82
AGRN-208ENST00000479707 WDR6Q9NNW5 1121 aaKnown RBP20.19■□□□□ 0.82
AGRN-208ENST00000479707 MAFFQ9ULX9 164 aa20.19■□□□□ 0.82
AGRN-208ENST00000479707 NME7Q9Y5B8 376 aa20.19■□□□□ 0.82
AGRN-208ENST00000479707 MYBPHLA2RUH7 354 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 DLL1O00548 723 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 TACC1O75410 805 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 FGFR1OPO95684 399 aaKnown RBP20.18■□□□□ 0.82
AGRN-208ENST00000479707 ASS1P00966 412 aaKnown RBP20.18■□□□□ 0.82
AGRN-208ENST00000479707 PCSK1P29120 753 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 MGAT5BQ3V5L5 792 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 RBM43Q6ZSC3 357 aaKnown RBP20.18■□□□□ 0.82
AGRN-208ENST00000479707 RTL10Q7L3V2 364 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 FBXL13Q8NEE6 735 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 TAF4BQ92750 862 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 SEPT5Q99719 369 aaPredicted RBP20.18■□□□□ 0.82
AGRN-208ENST00000479707 LPIN3Q9BQK8 851 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 SYT15Q9BQS2 421 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 SDCBP2Q9H190 292 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 APOBEC3GQ9HC16 384 aaKnown RBP20.18■□□□□ 0.82
AGRN-208ENST00000479707 TMEM63CQ9P1W3 806 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 DNMT3BQ9UBC3 853 aaKnown RBP20.18■□□□□ 0.82
AGRN-208ENST00000479707 DACH1Q9UI36 760 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 YIPF1Q9Y548 306 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 CLUHO75153 1309 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 C5orf42Q9H799 3197 aa20.18■□□□□ 0.82
AGRN-208ENST00000479707 C19orf67A6NJJ6 358 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 A8MXQ7 604 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 PAPLNO95428 1278 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 GNA14O95837 355 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 P4HA1P13674 534 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 ALDH1A3P47895 512 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 NOP14P78316 857 aaKnown RBP20.17■□□□□ 0.82
AGRN-208ENST00000479707 SASS6Q6UVJ0 657 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 CCDC150Q8NCX0 1101 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 CORO1BQ9BR76 489 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 RHOBTB2Q9BYZ6 727 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 DPEP3Q9H4B8 488 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 RAB20Q9NX57 234 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 CDH9Q9ULB4 789 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 PCDHB5Q9Y5E4 795 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 DENND4AQ7Z401 1863 aa20.17■□□□□ 0.82
AGRN-208ENST00000479707 C2CD4DB7Z1M9 353 aa20.16■□□□□ 0.82
AGRN-208ENST00000479707 LOC730098B7Z3J9 87 aa20.16■□□□□ 0.82
AGRN-208ENST00000479707 FAM163BP0C2L3 166 aa20.16■□□□□ 0.82
AGRN-208ENST00000479707 CCDC192P0DO97 292 aa20.16■□□□□ 0.82
AGRN-208ENST00000479707 PTPN2P17706 415 aa20.16■□□□□ 0.82
AGRN-208ENST00000479707 GBP2P32456 591 aaPredicted RBP20.16■□□□□ 0.82
AGRN-208ENST00000479707 CAVIN1Q6NZI2 390 aaKnown RBP20.16■□□□□ 0.82
AGRN-208ENST00000479707 GET4Q7L5D6 327 aaPredicted RBP20.16■□□□□ 0.82
AGRN-208ENST00000479707 ELMOD1Q8N336 334 aa20.16■□□□□ 0.82
AGRN-208ENST00000479707 SPPL2BQ8TCT7 592 aa20.16■□□□□ 0.82
AGRN-208ENST00000479707 ZNF512Q96ME7 567 aaPredicted RBP20.16■□□□□ 0.82
AGRN-208ENST00000479707 PKMYT1Q99640 499 aa20.16■□□□□ 0.82
AGRN-208ENST00000479707 CRTAC1Q9NQ79 661 aa20.16■□□□□ 0.82
AGRN-208ENST00000479707 CEP72Q9P209 647 aa20.16■□□□□ 0.82
AGRN-208ENST00000479707 NR2E1Q9Y466 385 aa20.16■□□□□ 0.82
AGRN-208ENST00000479707 NOTCH4Q99466 2003 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 VCANP13611 3396 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 FSHRP23945 695 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 ASPAP45381 313 aa20.15■□□□□ 0.82
AGRN-208ENST00000479707 FMO5P49326 533 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms