RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 SNRNP48Q6IEG0 339 aaKnown RBP14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 LVRNQ6Q4G3 990 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 C4orf50Q6ZRC1 276 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 LMNTD2Q8IXW0 634 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 ZNF75CPQ92670 426 aaPredicted RBP14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 VTI1AQ96AJ9 217 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 FAM136AQ96C01 138 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 FBXL18Q96ME1 805 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 SMC6Q96SB8 1091 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 TSC22D3Q99576 134 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 OSBPL8Q9BZF1 889 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 ALG13Q9NP73 1137 aaKnown RBP14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 SEPT9Q9UHD8 586 aaPredicted RBP14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 LRRD1A4D1F6 860 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 SIGLEC16A6NMB1 481 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 TRAFD1O14545 582 aaPredicted RBP14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 SP100P23497 879 aaPredicted RBP14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 ADRA1DP25100 572 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 JAK3P52333 1124 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 HMGCS2P54868 508 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 NLRP11P59045 1033 aaKnown RBP14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 NOP14P78316 857 aaKnown RBP14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 MRPS35P82673 323 aaKnown RBP14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 KRT76Q01546 638 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 KLC1Q07866 573 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 CCNG2Q16589 344 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 MTERF2Q49AM1 385 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 WASHC2DQ5SRD0 308 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 SLC30A9Q6PML9 568 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 RGS9BPQ6ZS82 235 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 DEFB132Q7Z7B7 95 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 TEKT4Q8WW24 435 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 BICD1Q96G01 975 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 ZNF333Q96JL9 665 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 VPS37BQ9H9H4 285 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 PAPOLBQ9NRJ5 636 aaKnown RBP14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 DNPEPQ9ULA0 475 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 KRT36O76013 467 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 EDN1P05305 212 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 ACADSP16219 412 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 KRT4P19013 534 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 MARK3P27448 753 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 PTPN4P29074 926 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 SSR1P43307 286 aaKnown RBP14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 CENPCQ03188 943 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 GAD2Q05329 585 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 AP1ARQ63HQ0 302 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 DLK2Q6UY11 383 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 NTPCRQ9BSD7 190 aaKnown RBP14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 PDLIM7Q9NR12 457 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 MYPNQ86TC9 1320 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 ZNF541Q9H0D2 1346 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 GOLGA8SH3BPF8 625 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 GOLGA8MH3BSY2 632 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 AHCYL1O43865 530 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 ABHD2P08910 425 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 RXRBP28702 533 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 PAPOLAP51003 745 aaKnown RBP14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 TMEM132BQ14DG7 1078 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 RCN1Q15293 331 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 ANKMY2Q8IV38 441 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 ZBED8Q8IZ13 594 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 RBBP8NLQ8NC74 664 aaPredicted RBP14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 CFAP57Q96MR6 1250 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 KLF6Q99612 283 aaPredicted RBP14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 ARL8BQ9NVJ2 186 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 HACL1Q9UJ83 578 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 C2CD2Q9Y426 696 aa14.03□□□□□ -0.16
PDZRN3-208ENST00000479530 KLHL33A6NCF5 533 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 C2orf71A6NGG8 1288 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 TTLL13PA6NNM8 815 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 GOLGA8RI6L899 631 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 PMM2O15305 246 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 NVLO15381 856 aaKnown RBP14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 NEFHP12036 1026 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 SFNP31947 248 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 PRKCEQ02156 737 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 ACSBG2Q5FVE4 666 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 HHATQ5VTY9 493 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 FOXB2Q5VYV0 432 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 RIBC1Q8N443 379 aaPredicted RBP14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 REPS2Q8NFH8 660 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 DTX3LQ8TDB6 740 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 PTPRN2Q92932 1015 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 POLR3FQ9H1D9 316 aaPredicted RBP14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 TLE6Q9H808 572 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 DCLRE1BQ9H816 532 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 APOBEC3GQ9HC16 384 aaKnown RBP14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 EXOC7Q9UPT5 735 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 ASB3Q9Y575 518 aa14.02□□□□□ -0.16
PDZRN3-208ENST00000479530 CFAP69A5D8W1 941 aa14.02□□□□□ -0.17
PDZRN3-208ENST00000479530 SNUPNO95149 360 aaKnown RBP14.02□□□□□ -0.17
PDZRN3-208ENST00000479530 PIK3CAP42336 1068 aa14.02□□□□□ -0.17
PDZRN3-208ENST00000479530 PSMC4P43686 418 aa14.02□□□□□ -0.17
PDZRN3-208ENST00000479530 ACTR2P61160 394 aa14.02□□□□□ -0.17
PDZRN3-208ENST00000479530 KPNB1Q14974 876 aaKnown RBP14.02□□□□□ -0.17
PDZRN3-208ENST00000479530 SLC45A4Q5BKX6 768 aa14.02□□□□□ -0.17
PDZRN3-208ENST00000479530 SNX30Q5VWJ9 437 aa14.02□□□□□ -0.17
PDZRN3-208ENST00000479530 TDRD10Q5VZ19 366 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms