RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 OSTM1Q86WC4 334 aa26.75■■□□□ 1.87
PERM1-203ENST00000479361 OR6B3Q8NGW1 331 aa26.75■■□□□ 1.87
PERM1-203ENST00000479361 ELMO3Q96BJ8 720 aa26.75■■□□□ 1.87
PERM1-203ENST00000479361 TMEM209Q96SK2 561 aa26.75■■□□□ 1.87
PERM1-203ENST00000479361 MRPL45Q9BRJ2 306 aaKnown RBP26.75■■□□□ 1.87
PERM1-203ENST00000479361 CYP3A43Q9HB55 503 aa26.75■■□□□ 1.87
PERM1-203ENST00000479361 APOBEC3GQ9HC16 384 aaKnown RBP26.75■■□□□ 1.87
PERM1-203ENST00000479361 CDH9Q9ULB4 789 aa26.75■■□□□ 1.87
PERM1-203ENST00000479361 FAM50BQ9Y247 325 aa26.75■■□□□ 1.87
PERM1-203ENST00000479361 PRRG1O14668 218 aa26.74■■□□□ 1.87
PERM1-203ENST00000479361 ZMYND10O75800 440 aa26.74■■□□□ 1.87
PERM1-203ENST00000479361 C8AP07357 584 aa26.74■■□□□ 1.87
PERM1-203ENST00000479361 ASPAP45381 313 aa26.74■■□□□ 1.87
PERM1-203ENST00000479361 SMAD4Q13485 552 aaKnown RBP26.74■■□□□ 1.87
PERM1-203ENST00000479361 SLC39A12Q504Y0 691 aa26.74■■□□□ 1.87
PERM1-203ENST00000479361 TCP11X2Q5H9J9 407 aa26.74■■□□□ 1.87
PERM1-203ENST00000479361 PPM1LQ5SGD2 360 aa26.74■■□□□ 1.87
PERM1-203ENST00000479361 TCEAL8Q8IYN2 117 aa26.74■■□□□ 1.87
PERM1-203ENST00000479361 CMASQ8NFW8 434 aaPredicted RBP26.74■■□□□ 1.87
PERM1-203ENST00000479361 SLC7A14Q8TBB6 771 aa26.74■■□□□ 1.87
PERM1-203ENST00000479361 C2orf15Q8WU43 125 aaKnown RBP26.74■■□□□ 1.87
PERM1-203ENST00000479361 TUBGCP2Q9BSJ2 902 aa26.74■■□□□ 1.87
PERM1-203ENST00000479361 BCO2Q9BYV7 579 aa26.74■■□□□ 1.87
PERM1-203ENST00000479361 CYP4F11Q9HBI6 524 aa26.74■■□□□ 1.87
PERM1-203ENST00000479361 HNRNPA1P09651 372 aaKnown RBP eCLIP26.73■■□□□ 1.87
PERM1-203ENST00000479361 PRKCSHP14314 528 aaPredicted RBP26.73■■□□□ 1.87
PERM1-203ENST00000479361 ACAT1P24752 427 aaKnown RBP26.73■■□□□ 1.87
PERM1-203ENST00000479361 HOXA9P31269 272 aa26.73■■□□□ 1.87
PERM1-203ENST00000479361 ZNF165P49910 485 aa26.73■■□□□ 1.87
PERM1-203ENST00000479361 CDH8P55286 799 aa26.73■■□□□ 1.87
PERM1-203ENST00000479361 NFE2Q16621 373 aaPredicted RBP26.73■■□□□ 1.87
PERM1-203ENST00000479361 INTS6LQ5JSJ4 861 aaKnown RBP26.73■■□□□ 1.87
PERM1-203ENST00000479361 RARS2Q5T160 578 aaKnown RBP26.73■■□□□ 1.87
PERM1-203ENST00000479361 CDKAL1Q5VV42 579 aa26.73■■□□□ 1.87
PERM1-203ENST00000479361 CYP26C1Q6V0L0 522 aa26.73■■□□□ 1.87
PERM1-203ENST00000479361 AOPEPQ8N6M6 819 aa26.73■■□□□ 1.87
PERM1-203ENST00000479361 C12orf76Q8N812 135 aaPredicted RBP26.73■■□□□ 1.87
PERM1-203ENST00000479361 PGLYRP2Q96PD5 576 aa26.73■■□□□ 1.87
PERM1-203ENST00000479361 S1PR5Q9H228 398 aa26.73■■□□□ 1.87
PERM1-203ENST00000479361 ADAM7Q9H2U9 754 aa26.73■■□□□ 1.87
PERM1-203ENST00000479361 FANCLQ9NW38 375 aa26.73■■□□□ 1.87
PERM1-203ENST00000479361 CCDC195A0A1B0GUA6 201 aa26.72■■□□□ 1.87
PERM1-203ENST00000479361 SMTNL1A8MU46 457 aa26.72■■□□□ 1.87
PERM1-203ENST00000479361 A8MXQ7 604 aa26.72■■□□□ 1.87
PERM1-203ENST00000479361 CAVIN2O95810 425 aa26.72■■□□□ 1.87
PERM1-203ENST00000479361 LMO2P25791 158 aa26.72■■□□□ 1.87
PERM1-203ENST00000479361 RAP1GAPP47736 663 aa26.72■■□□□ 1.87
PERM1-203ENST00000479361 MAPRE1Q15691 268 aaKnown RBP26.72■■□□□ 1.87
PERM1-203ENST00000479361 TMC5Q6UXY8 1006 aa26.72■■□□□ 1.87
PERM1-203ENST00000479361 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.72■■□□□ 1.87
PERM1-203ENST00000479361 TTC39CQ8N584 583 aa26.72■■□□□ 1.87
PERM1-203ENST00000479361 ANKRD20A12PQ8NF67 263 aa26.72■■□□□ 1.87
PERM1-203ENST00000479361 SYT15Q9BQS2 421 aa26.72■■□□□ 1.87
PERM1-203ENST00000479361 APOL5Q9BWW9 433 aa26.72■■□□□ 1.87
PERM1-203ENST00000479361 DNAI2Q9GZS0 605 aa26.72■■□□□ 1.87
PERM1-203ENST00000479361 FAM124BQ9H5Z6 455 aaPredicted RBP26.72■■□□□ 1.87
PERM1-203ENST00000479361 HSFX1Q9UBD0 423 aa26.72■■□□□ 1.87
PERM1-203ENST00000479361 MTMR11A4FU01 709 aa26.71■■□□□ 1.87
PERM1-203ENST00000479361 LRRN2O75325 713 aa26.71■■□□□ 1.87
PERM1-203ENST00000479361 RFPL2O75678 378 aa26.71■■□□□ 1.87
PERM1-203ENST00000479361 TPM2P07951 284 aa26.71■■□□□ 1.87
PERM1-203ENST00000479361 PDGFRBP09619 1106 aa26.71■■□□□ 1.87
PERM1-203ENST00000479361 WEE2P0C1S8 567 aa26.71■■□□□ 1.87
PERM1-203ENST00000479361 TRIM21P19474 475 aaKnown RBP26.71■■□□□ 1.87
PERM1-203ENST00000479361 VWA3BQ502W6 1294 aa26.71■■□□□ 1.87
PERM1-203ENST00000479361 PTCRAQ6ISU1 281 aaPredicted RBP26.71■■□□□ 1.87
PERM1-203ENST00000479361 LRRTM3Q86VH5 581 aa26.71■■□□□ 1.87
PERM1-203ENST00000479361 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.71■■□□□ 1.87
PERM1-203ENST00000479361 SPPL2BQ8TCT7 592 aa26.71■■□□□ 1.87
PERM1-203ENST00000479361 RIPOR3Q96MK2 946 aa26.71■■□□□ 1.87
PERM1-203ENST00000479361 NT5C1BQ96P26 610 aa26.71■■□□□ 1.87
PERM1-203ENST00000479361 SDCBP2Q9H190 292 aa26.71■■□□□ 1.87
PERM1-203ENST00000479361 SPTBN5Q9NRC6 3674 aaKnown RBP26.7■■□□□ 1.86
PERM1-203ENST00000479361 GTPBP10A4D1E9 387 aaKnown RBP26.7■■□□□ 1.86
PERM1-203ENST00000479361 SEC24AO95486 1093 aa26.7■■□□□ 1.86
PERM1-203ENST00000479361 DUSP4Q13115 394 aa26.7■■□□□ 1.86
PERM1-203ENST00000479361 UNC93AQ86WB7 457 aa26.7■■□□□ 1.86
PERM1-203ENST00000479361 EHBP1Q8NDI1 1231 aa26.7■■□□□ 1.86
PERM1-203ENST00000479361 TNIP3Q96KP6 325 aa26.7■■□□□ 1.86
PERM1-203ENST00000479361 ASB2Q96Q27 587 aa26.7■■□□□ 1.86
PERM1-203ENST00000479361 RHOBTB2Q9BYZ6 727 aa26.7■■□□□ 1.86
PERM1-203ENST00000479361 PRKD2Q9BZL6 878 aa26.7■■□□□ 1.86
PERM1-203ENST00000479361 NDST4Q9H3R1 872 aa26.7■■□□□ 1.86
PERM1-203ENST00000479361 GCNT4Q9P109 453 aa26.7■■□□□ 1.86
PERM1-203ENST00000479361 GTF3C4Q9UKN8 822 aa26.7■■□□□ 1.86
PERM1-203ENST00000479361 PCDHB5Q9Y5E4 795 aa26.7■■□□□ 1.86
PERM1-203ENST00000479361 MTCL1Q9Y4B5 1905 aaKnown RBP26.69■■□□□ 1.86
PERM1-203ENST00000479361 BECN2A8MW95 431 aa26.69■■□□□ 1.86
PERM1-203ENST00000479361 MBTPS2O43462 519 aa26.69■■□□□ 1.86
PERM1-203ENST00000479361 HCRTO43612 131 aa26.69■■□□□ 1.86
PERM1-203ENST00000479361 XYLBO75191 536 aa26.69■■□□□ 1.86
PERM1-203ENST00000479361 PAPLNO95428 1278 aa26.69■■□□□ 1.86
PERM1-203ENST00000479361 LRG1P02750 347 aa26.69■■□□□ 1.86
PERM1-203ENST00000479361 TBXAS1P24557 533 aaPredicted RBP26.69■■□□□ 1.86
PERM1-203ENST00000479361 INCA1Q0VD86 236 aa26.69■■□□□ 1.86
PERM1-203ENST00000479361 NCAPHQ15003 741 aa26.69■■□□□ 1.86
PERM1-203ENST00000479361 ATAT1Q5SQI0 421 aa26.69■■□□□ 1.86
PERM1-203ENST00000479361 FAM171BQ6P995 826 aa26.69■■□□□ 1.86
PERM1-203ENST00000479361 GBP6Q6ZN66 633 aa26.69■■□□□ 1.86
PERM1-203ENST00000479361 C4orf50Q6ZRC1 276 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms